DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31342 and Apba1

DIOPT Version :10

Sequence 1:NP_001097763.1 Gene:CG31342 / 41592 FlyBaseID:FBgn0051342 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_796008.2 Gene:Apba1 / 319924 MGIID:1860297 Length:842 Species:Mus musculus


Alignment Length:945 Identity:180/945 - (19%)
Similarity:305/945 - (32%) Gaps:300/945 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 PLPPPPPVPAALVPGVERVVAPSHQAPPAPPPEPPTSPVPTTPAPPAPAPAAMSNT-LTQHLLNM 252
            |.|.||| ||...|       ..|:..|||||.||.............|.:|.:.: ...|....
Mouse    40 PSPSPPP-PAGHEP-------EDHRGHPAPPPPPPPQEEEEEERGECLARSASTESGFHNHTDTA 96

  Fly   253 LSDPISTYSEQI-SESVESASGQEDVAVAEEPPAEQPT-TSDAD--------------------- 294
            ..|.::...:.. :|..:.|..:...||...|.||:.| .::|:                     
Mouse    97 EGDVLAAARDGYEAERAQDADDESAYAVQYRPEAEEYTEQAEAEHVEAAQRRALPNHLHFHSLEH 161

  Fly   295 ---LNLS---------------DDEYLSPL---------------------LRKACMLTEN---- 316
               :|.:               |:.|..|.                     .|....|.|.    
Mouse   162 EEAMNAAYSGYVYTHRLFHRAEDEPYAEPYADYGGLQEHVYEEIGDAPELEARDGLRLYERERDE 226

  Fly   317 ---------GARV----------------DVVVVTGQRV-SADQVLNLEHILQCERLIPRPQTSR 355
                     |||:                :.......|: |.:|..:::.|:        .:..:
Mouse   227 AAAYRQEALGARLHHYDERSDGESDSPEKEAEFAPYPRMDSYEQEEDIDQIV--------AEVKQ 283

  Fly   356 SMSAGAADKSKRPQRKPLQSQSSSAAPTNSADSQDNITIIQVSNTANSGQEHPPELPPKNTTTAE 420
            |||:.:.||:  .:..|...|....|||......|:..:     .|.:||:......|..:...:
Mouse   284 SMSSQSLDKA--AEDMPEAEQDLERAPTPGGGHPDSPGL-----PAPAGQQQRVVGTPGGSEVGQ 341

  Fly   421 VFRFPEVKSKPQTNAKQQPIQTHHEYKSNVQIIPSNASSSTSTIQVLGKQSSSSNPYTTPVKQSS 485
            .:      ||.:.:|....|:...|....|:         |.||:         :|||....:..
Mouse   342 RY------SKEKRDAISLAIKDIKEAIEEVK---------TRTIR---------SPYTPDEPKEP 382

  Fly   486 SNGSSSQVSGTTKV--KVLGDGDATTKVAVYGTCYPAAGGSAPSSSAASSSV-----NPAKPQTP 543
            .......:|.|...  :...|||:           |:.|.|:| ..|.|||:     :|.:..|.
Mouse   383 IWVMRQDISPTRDCDDQRPVDGDS-----------PSPGSSSP-LGAESSSIPLHPGDPTEASTN 435

  Fly   544 RLSKKIILSANTSGITNISVNTEQGSDSIISGNIHYEKVFLSSSIPITSRSSPTR---------- 598
            :.|:|.:.|..    |.:.|......:.:|.| |.:...:|.|: .:.|..:|::          
Mouse   436 KESRKSLASFP----TYVEVPGPCDPEDLIDG-IIFAANYLGST-QLLSDKTPSKNVRMMQAQEA 494

  Fly   599 VANTNTTQPVTNGSPALPRRRLASPATAQPVTPNAAGRATPQLTRGLTELVISSRPSRRDFHYLK 663
            |:...|.|.:...      |:.|....:||:|.              .:|.||::       .:|
Mouse   495 VSRIKTAQKLAKS------RKKAPEGESQPMTE--------------VDLFISTQ-------RIK 532

  Fly   664 LLNT---------PLKT--------------KTSHKSTSAANNNIEQSTPSSSNSTQVTPTQRNN 705
            :||.         ||:|              .......|.:..|:|.|.||.             
Mouse   533 VLNADTQEPMMDHPLRTISYIADIGNIVVLMARRRMPRSNSQENVEASHPSQ------------- 584

  Fly   706 TSIVTGDSQEQRR---RSSSTSDAQAPLQRVPQPATQRNANNNEFTPSRNGAFRMQPPPQGTPPS 767
                  |.:.|.:   ....:.|||...|.:.|..   :....||..: ||              
Mouse   585 ------DGKRQYKMICHVFESEDAQLIAQSIGQAF---SVAYQEFLRA-NG-------------- 625

  Fly   768 STNPAQQSPNKRLTLREQQVMQLRREIMHPG------GVRLNLRRKDCVGSI----AWVEAFGGV 822
             .||...|..:...|...|.| ...:::|..      .|.:..::.:.:|.:    .|......|
Mouse   626 -INPEDLSQKEYSDLLNTQDM-YNDDLIHFSKSENCKDVFIEKQKGEILGVVIVESGWGSILPTV 688

  Fly   823 WIAGWKQKEHPVLYNALHIGDQLLSIAGVS-----ISSAAEANKIIRNTNTLFVEVLLRRIPFGR 882
            .||.............|:||||::||.|.|     :|:.....|.::|.:.:.:.::  |.|...
Mouse   689 IIANMMHGGPAEKSGKLNIGDQIMSINGTSLVGLPLSTCQSIIKGLKNQSRVKLNIV--RCPPVT 751

  Fly   883 AYAIRRDREGQCLGL-IRDGNTSTIVDVVPNSLAARHGLPPKTQSCDGNSLTFWMLTEINGRSLN 946
            ...|||......||. :::|   .|..::...:|.|.|:....:           :.||||:|:.
Mouse   752 TVLIRRPDLRYQLGFSVQNG---IICSLMRGGIAERGGVRVGHR-----------IIEINGQSVV 802

  Fly   947 LFFKDFEIRDRLNSVGRDISILVQPSDLITKLKKQ 981
            ....:..:....|:|| :|.:...|:.:...|..|
Mouse   803 ATPHEKIVHILSNAVG-EIHMKTMPAAMYRLLTAQ 836

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31342NP_001097763.1 PHA03247 <589..785 CDD:223021 40/231 (17%)
PDZ_canonical <838..866 CDD:483948 11/32 (34%)
PDZ_canonical 879..969 CDD:483948 20/90 (22%)
Apba1NP_796008.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..121 22/88 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 238..349 22/131 (17%)
Mint1_CID 348..393 CDD:439308 11/62 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 366..439 21/102 (21%)
PTB_X11 457..628 CDD:269919 41/237 (17%)
Autoinhibitory helix linker. /evidence=ECO:0000250 631..648 4/17 (24%)
PDZ1_APBA1_3-like 660..745 CDD:467203 18/84 (21%)
PDZ2_APBA1_3-like 749..826 CDD:467255 19/91 (21%)

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