DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7381 and sdz-23

DIOPT Version :9

Sequence 1:NP_650242.1 Gene:CG7381 / 41589 FlyBaseID:FBgn0038098 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_505091.1 Gene:sdz-23 / 186544 WormBaseID:WBGene00019066 Length:267 Species:Caenorhabditis elegans


Alignment Length:220 Identity:44/220 - (20%)
Similarity:67/220 - (30%) Gaps:81/220 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   446 NCRKP--IQYHLSCTSNSQC----------SPFGAS---YCHPEIPRR------CTCEEYALYDA 489
            ||...  :...:|.:.|..|          |.:|.|   ...|.||:.      .:.....::|.
 Worm    17 NCYSTGIVWIRMSASKNMACRMEVIDKDNSSRYGISLDLQLQPNIPKEFVLPMPTSSSPIPIFDY 81

  Fly   490 IKQ--------LCEYKRGLGAECESNDGCPVDHSVCSNRVCVCADNYFEKDDQCMRGIGADCSVE 546
            ..|        :...|:.:......||  |..|...||.                .|:....|:.
 Worm    82 SIQTLSLITGNIISGKKNVRLPLLVND--PWVHKTISNE----------------NGVSVFTSIR 128

  Fly   547 DDCIPE--NTECQEKDEEDQSRTCQCRKGYVHFKDECLKEAEELEDECVEDEQCKPLLASCNSEG 609
            .:|:|.  ..:||          ..|..|....:|||.|.      :|..:.||:    ...||.
 Worm   129 FECLPSFYGPKCQ----------YYCTSGEKCSRDECPKR------KCQNNSQCQ----FDGSES 173

  Fly   610 KCGCNDEQHAKNGVCETKRELGESC 634
            ||.|      ::|.      :||.|
 Worm   174 KCVC------QSGY------IGEFC 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7381NP_650242.1 EB 68..112 CDD:279949
EB 101..155 CDD:279949
EB 570..624 CDD:279949 15/53 (28%)
EB 613..665 CDD:279949 5/22 (23%)
sdz-23NP_505091.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.