DRSC/TRiP Functional Genomics Resources

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Protein Alignment grsm and Dip-B

DIOPT Version :9

Sequence 1:NP_731749.3 Gene:grsm / 41587 FlyBaseID:FBgn0040493 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001287316.1 Gene:Dip-B / 48450 FlyBaseID:FBgn0000454 Length:508 Species:Drosophila melanogaster


Alignment Length:483 Identity:122/483 - (25%)
Similarity:196/483 - (40%) Gaps:86/483 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 RVTEETFLNAVACLHPAPTDKVSLYLDVATVAALPLKASRHNTASRAHAITRLVKNHVLNVSEES 231
            |..:::|.::::|......|:..:|..|:.:.......|....|.|:       ...||.....:
  Fly    45 RKFDKSFDSSISCFKVPNVDQPVVYAPVSELTDYDDVRSYQEAAKRS-------MEKVLKAGFHT 102

  Fly   232 VVLVCERENLF--ASACAVVRAF-----PLYSRKTGNLLASSQPKLNLGCGDGNANSGRNVVNVE 289
            .:|...:...|  ...|.|:.|.     |:..|:.|.|.......|::...|..|.:        
  Fly   103 PLLFVPKVKRFPEVELCTVLGALEQLYVPIQLREAGTLKDPRVTTLSVQIDDPRAEA-------- 159

  Fly   290 FVLINKDGCIESEPLTDDELNCLNETTRAIRMTARIVDMPCNE----MNVDHFIQEVEDVGRELC 350
                     |..|.|          ...|.|..||.:.:...|    :.|:.:|:.:.|.     
  Fly   160 ---------IFQEAL----------ILEAGRFVARDIGVGDPERMTPIQVEKYIKPLFDK----- 200

  Fly   351 ITPKVIRGEELLEQGFGGIYGVGKAA-AVP---PALVVLSHE-PKGAQETIALVGKGIVYDTGGL 410
            :...||...::|::.:.....|.:|| ||.   ..::.|.:: ||.|::|:.|||||:.|||||.
  Fly   201 LNVNVISDTQVLQKEYPLFAAVNRAADAVERHRGRIIFLEYKPPKPARKTLMLVGKGVTYDTGGA 265

  Fly   411 SIKAKTGMPGMKRDCGGAAAILGTFYAAVQCGFRDNLH--AVFCLAENSVGPNATRPDDIHTLYS 473
            .|||...|.||.||..||||:.| |...|.....|::|  |..|:..||||......|::.|..:
  Fly   266 DIKAGGVMAGMSRDKCGAAAVAG-FMQVVSQLQPDDIHVVAALCMVRNSVGEECYVADEVITSRA 329

  Fly   474 GRTVEINNTDAEGRLVLADGVC-----YANKDLKANIILDMATLTGAQGVATGKYHGAILTNSET 533
            |..|.|.|||||||:.:.|.:|     ...::|....:..:|||||...::.|:.....:.||..
  Fly   330 GLHVRIGNTDAEGRMCMTDALCRMKELVVEQNLPDPHLFTIATLTGHAFISAGEGQSIAIDNSVA 394

  Fly   534 W---EAKSLQ-AGRKSGDLLAPIIYCPELHFSEFA--------SAIADMKNSVADRQNAQSSCAG 586
            .   .|:.|| ||:..|:.....|..|    |:|:        ..:....|:.:.|.........
  Fly   395 HREDHARRLQAAGQAFGEPFEVSILRP----SDFSFNAGKVIGEDLVQANNAPSVRTPRGHQVPA 455

  Fly   587 LFIAAHLGFDYPGI-------WMHVDMA 607
            .|:....|.|..|:       :.|:|:|
  Fly   456 AFMIKASGLDKHGLDSMLPIKYTHIDIA 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grsmNP_731749.3 Peptidase_M17 141..628 CDD:238247 122/483 (25%)
Dip-BNP_001287316.1 Peptidase_M17 58..502 CDD:238247 119/470 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45472717
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0260
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3211
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D562530at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11963
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1683
SonicParanoid 00.000 Not matched by this tool.
76.830

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