DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp304a1 and Cyp2u1

DIOPT Version :9

Sequence 1:NP_731751.1 Gene:Cyp304a1 / 41586 FlyBaseID:FBgn0038095 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_082092.2 Gene:Cyp2u1 / 71519 MGIID:1918769 Length:530 Species:Mus musculus


Alignment Length:539 Identity:153/539 - (28%)
Similarity:249/539 - (46%) Gaps:76/539 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 AVFLCLSYRYAV---------GRPSGFPPGPPKIPLFGSYLFMLIINFKYLHKAALTLSRWYKSD 67
            |:.|||   .||         .|..|.||||...||.|::..:|:..|.   :....|....::|
Mouse    27 ALLLCL---LAVLLGWVWLRRQRACGIPPGPKPRPLVGNFGHLLVPRFL---RPQFWLGSGSQTD 85

  Fly    68 IIGLHV-----------------GPFPVAVVHSADGVREILNNQ--VFDGRPQLFVAAMRDPGQD 113
            .:|.||                 |...|.|:.....|||.|..|  ||..||::.:.::....:.
Mouse    86 TVGQHVYLARMARVYGNIFSFFIGHRLVVVLSDFHSVREALVQQAEVFSDRPRMPLISIMTKEKG 150

  Fly   114 VRGIFFQDGPLWKEQRRFILRYLRDFGFGRRFDQLEL---VIQEQLNDMLDLIRNGPKYPHEHEM 175
            :  :|...||:||:||||....||.||.|:    |.|   :|:|              :.:..|.
Mouse   151 I--VFAHYGPIWKQQRRFSHSTLRHFGLGK----LSLEPRIIEE--------------FAYVKEA 195

  Fly   176 VKSGGYRVLLPLLFNPFSANAHFYIVYNECL------SREEMGKLVKLCQMGIQFQRNADDYGKM 234
            ::..|.....|.   |..:||...|:.:.|.      :.:|..|::.....|::...::..:  :
Mouse   196 MQKHGEAPFSPF---PIISNAVSNIICSLCFGQRFDYTNKEFKKVLDFMSRGLEICLHSQLF--L 255

  Fly   235 LSIIPWIRHIWPEWSGYNKLNESNLFVRQFFADFVDKYLDSYEEGVERNFMDVYIAEMRRGPG-- 297
            ::|.||..::  .:..:.:|.:....:..|..:.:.::.:|.:....::|:|:|:..|....|  
Mouse   256 INICPWFYYL--PFGPFKELRQIERDISCFLKNIIREHQESLDASNPQDFIDMYLLHMEEEQGAS 318

  Fly   298 --YGFNRDQLIMGLVDFSFPAFTAIGVQLSLLVQYLMLYPAVLRRVQNEIDEVVGCGRLPNLEDR 360
              ..|:.|.|...:.|............|...:.|:.|.|.|.::|..||:.|:||.|.|:|.|:
Mouse   319 RRSSFDEDYLFYIIGDLFIAGTDTTTNSLLWCLLYMSLNPDVQKKVHEEIERVIGCDRAPSLTDK 383

  Fly   361 KNLPFTEATIREGLRIETLVPSDVPHKALEDTELLGYRIPKDTIVVPSLYAFHSDARIWSDPEQF 425
            ..:|:|||||.|..|:..:||..:||...|.|.|.|:.|||.|:|:.:|::.|.|..||..|:.|
Mouse   384 AQMPYTEATIMEVQRLSMVVPLAIPHMTSEKTVLQGFTIPKGTVVLINLWSVHRDPAIWEKPDDF 448

  Fly   426 RPERFLDADGKLCLKLDVSLPFGAGKRLCAGETFARNMLFLVTATMCQHFDFVLGPNDRLPDLSQ 490
            .|.||||..|:| ||.:..:|||.|||:|.||..|:..|||:..::.|.|.|.|......|.::.
Mouse   449 CPHRFLDDQGQL-LKRETFIPFGIGKRVCMGEQLAKMELFLMFVSLMQTFTFALPEGSEKPVMTG 512

  Fly   491 NLNGLIISPPDFWLQLQDR 509
            .. ||.::|..|.:.:..|
Mouse   513 RF-GLTLAPHPFNVTISKR 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp304a1NP_731751.1 p450 30..504 CDD:278495 144/505 (29%)
Cyp2u1NP_082092.2 p450 51..523 CDD:278495 143/503 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.