DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp304a1 and Cyp1a1

DIOPT Version :9

Sequence 1:NP_731751.1 Gene:Cyp304a1 / 41586 FlyBaseID:FBgn0038095 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_036672.3 Gene:Cyp1a1 / 24296 RGDID:2458 Length:524 Species:Rattus norvegicus


Alignment Length:526 Identity:146/526 - (27%)
Similarity:229/526 - (43%) Gaps:90/526 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TETLL---TICAAVFLCLSYRYAVGRPSGFPPGPPKIPLFGSYLFMLIINFKYLHKAALTLSRWY 64
            ||.||   |.|...::....|..|.:....||||..:|..|..|.:    .|..|.:...||:.|
  Rat    14 TELLLAVTTFCLGFWVVRVTRTWVPKGLKSPPGPWGLPFIGHVLTL----GKNPHLSLTKLSQQY 74

  Fly    65 KSDIIGLHVGPFPVAVVHSADGVREILNNQ--VFDGRPQLFVAAMRDPGQDVRGIFFQD-GPLWK 126
             .|::.:.:|..||.|:...:.:::.|..|  .|.|||.|:...:...||.:  .|..| ||||.
  Rat    75 -GDVLQIRIGSTPVVVLSGLNTIKQALVKQGDDFKGRPDLYSFTLIANGQSM--TFNPDSGPLWA 136

  Fly   127 EQRRFILRYLRDFGFGRRFDQLELVIQEQLNDMLDLIRNGPK-----YPHEHEMVKSGGYRV--- 183
            .:||.....|:.|.                      |.:.|.     |..|| :.|...|.:   
  Rat   137 ARRRLAQNALKSFS----------------------IASDPTLASSCYLEEH-VSKEAEYLISKF 178

  Fly   184 --LLPLL--FNPFSANAHFYIVYNE-------CLSR------EEMGKLVKLCQMGIQFQRNADDY 231
              |:..:  |:||.     |:|.:.       |..|      :|:..:|.|          ::::
  Rat   179 QKLMAEVGHFDPFK-----YLVVSVANVICAICFGRRYDHDDQELLSIVNL----------SNEF 228

  Fly   232 GKM------LSIIPWIRHIWPEWSGYNKLNESNLFVRQFFADFVDKYLDSYEEGVERNFMDVYI- 289
            |::      ...||.:|:: |. |..:...:.|.....|....:.::..::|:|..|:..|..| 
  Rat   229 GEVTGSGYPADFIPILRYL-PN-SSLDAFKDLNKKFYSFMKKLIKEHYRTFEKGHIRDITDSLIE 291

  Fly   290 -AEMRR---GPGYGFNRDQLIMGLVDFSFPAFTAIGVQLSLLVQYLMLYPAVLRRVQNEIDEVVG 350
             .:.||   ......:.|::|..:.|.....|..|...:|..:.||:..|.:.|::|.|:|.|:|
  Rat   292 HCQDRRLDENANVQLSDDKVITIVFDLFGAGFDTITTAISWSLMYLVTNPRIQRKIQEELDTVIG 356

  Fly   351 CGRLPNLEDRKNLPFTEATIREGLRIETLVPSDVPHKALEDTELLGYRIPKDTIVVPSLYAFHSD 415
            ..|.|.|.||..||:.||.|.|..|..:.||..:||..:.||.|.|:.|||...|..:.:..:.|
  Rat   357 RDRQPRLSDRPQLPYLEAFILETFRHSSFVPFTIPHSTIRDTSLNGFYIPKGHCVFVNQWQVNHD 421

  Fly   416 ARIWSDPEQFRPERFLDADGKLCLKL-DVSLPFGAGKRLCAGETFARNMLFLVTATMCQHFDFVL 479
            ..:|.||.:|||||||.:.|.|...| :..:.||.|||.|.|||..|..:||..|.:.|..:|.:
  Rat   422 QELWGDPNEFRPERFLTSSGTLDKHLSEKVILFGLGKRKCIGETIGRLEVFLFLAILLQQMEFNV 486

  Fly   480 GPNDRL 485
            .|.:::
  Rat   487 SPGEKV 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp304a1NP_731751.1 p450 30..504 CDD:278495 138/496 (28%)
Cyp1a1NP_036672.3 Mitochondrial targeting signal. /evidence=ECO:0000269|PubMed:19401463, ECO:0000269|PubMed:9348277 33..44 2/10 (20%)
CYP1A 74..509 CDD:410769 127/462 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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