DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp304a1 and Cyp2c13

DIOPT Version :9

Sequence 1:NP_731751.1 Gene:Cyp304a1 / 41586 FlyBaseID:FBgn0038095 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_612523.1 Gene:Cyp2c13 / 171521 RGDID:620363 Length:490 Species:Rattus norvegicus


Alignment Length:511 Identity:139/511 - (27%)
Similarity:246/511 - (48%) Gaps:43/511 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLTICAAVFLCLSYRYAVGRPSGFPPGPPKIPLFGSYLFMLIINFKYLHKAALTLSRWYKSDIIG 70
            ||::...:||.| :|.:.|| ...||||..:|:.|::   ..::.|.:.::....|:.| ..:..
  Rat     8 LLSLFFLLFLSL-WRLSSGR-GKLPPGPTPLPIIGNF---FQVDMKDIRQSLTNFSKTY-GPVYT 66

  Fly    71 LHVGPFPVAVVHSADGVREIL--NNQVFDGRPQLFVAAMRDPGQDVRGIFFQDGPLWKEQRRFIL 133
            |:||..|..|:|..:.::|.|  :.:.|.||.:|.:......||   ||.|..|.:||..|.|.:
  Rat    67 LYVGSQPTVVLHGYEALKEALVDHGEEFSGRGRLPICEKVAKGQ---GIAFSHGNVWKATRHFTV 128

  Fly   134 RYLRDFGFGRRFDQLELVIQEQLNDMLDLIR--NGPKYPHEHEMVKSGGYRVLLPLLFNPFSANA 196
            :.||:.|.|:  ..:|..:||:...::..::  ||.....:..|..:.|..:...:|.|.|....
  Rat   129 KTLRNLGMGK--GTIEDKVQEEAKWLVKELKKTNGSPCDPQFIMGCAPGNVICCIILQNRFDYED 191

  Fly   197 HFYIVYNECLSREEMGKLVKLCQM-GIQFQRNADDYGKMLSIIPWIRHIWPEWSGYNKLNESNLF 260
            ..::..     .|::.:.||:... |||          :.:|.|.:....|  ..:|...::..:
  Rat   192 KDFLNL-----IEKVNEAVKIISSPGIQ----------VFNIFPILLDYCP--GNHNIYLKNYTW 239

  Fly   261 VRQFFADFVDKYLDSYEEGVERNFMDVYIAEMRR---GPGYGFNRDQLIMGLVDFSFPAFTAIGV 322
            |:.:..:.:.::.:|.:....|:|:|.::.|..:   .....:..:.|.:.:.|..|.....:..
  Rat   240 VKSYLLEKIKEHEESLDVSNPRDFIDYFLIERNQENANQWMNYTLEHLAIMVTDLFFAGIETVSS 304

  Fly   323 QLSLLVQYLMLYPAVLRRVQNEIDEVVGCGRLPNLEDRKNLPFTEATIREGLRIETLVPSDVPHK 387
            .:...:..||.||.|..:||.|||.|:|..|.|:::||.::|:|.|.:.|..|...:.|:.:.|.
  Rat   305 TMRFALLLLMKYPHVTAKVQEEIDHVIGRHRSPSMQDRSHMPYTNAMVHEVQRYIDIGPNGLLHD 369

  Fly   388 ALEDTELLGYRIPKDTIVVPSLYAFHSDARIWSDPEQFRPERFLDADGKLCLKLDVSLPFGAGKR 452
            ...||:...|.|||.|.|:.||.:...|::.:.:||.|.|..|||.:|.. .|.|..:||.||||
  Rat   370 VTCDTKFRNYFIPKGTAVLTSLTSVLHDSKEFPNPEMFDPGHFLDENGNF-KKSDYFIPFSAGKR 433

  Fly   453 LCAGETFARNMLFLVTATMCQHFDF--VLGPND-RLPDLSQNLNGLIISPPDFWLQ 505
            :|.||:.||..|||...|:.|:|..  ::.|.| ....:..:|:.:   ||.|.::
  Rat   434 MCLGESLARMELFLFLTTILQNFKLKSLVDPKDINTTPICSSLSSV---PPTFQMR 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp304a1NP_731751.1 p450 30..504 CDD:278495 131/484 (27%)
Cyp2c13NP_612523.1 p450 30..487 CDD:278495 131/487 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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