DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp304a1 and Cyp2c40

DIOPT Version :9

Sequence 1:NP_731751.1 Gene:Cyp304a1 / 41586 FlyBaseID:FBgn0038095 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_034134.3 Gene:Cyp2c40 / 13099 MGIID:1306815 Length:491 Species:Mus musculus


Alignment Length:516 Identity:140/516 - (27%)
Similarity:243/516 - (47%) Gaps:57/516 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLTICAAVFLCLS-YRYAVGRPSGFPPGPPKIPLFGSYLFMLIINFKYLHKAALTLSRWYKSDII 69
            :|.:|.:..|.|| :|....| ...||||..:|:.|:|   .:|:.|.:.:.....|:.| ..:.
Mouse     6 VLVLCLSFLLVLSLWRQRSAR-GNLPPGPTPLPIIGNY---HLIDMKDIGQCLTNFSKTY-GPVF 65

  Fly    70 GLHVGPFPVAVVHSADGVREIL--NNQVFDGRPQLFVAAMRDPGQDVRGIFFQDGPLWKEQRRFI 132
            .|:.|..|:.|:|..:.::|.|  :.:.|.||.::.|......|   :||.|..|.:||..|.|.
Mouse    66 TLYFGSQPIVVLHGYEAIKEALIDHGEEFSGRGRIPVFDKVSTG---KGIGFSHGNVWKATRVFT 127

  Fly   133 LRYLRDFGFGRRFDQLELVIQEQLNDMLDLIR--NG----PKYPHEHEMVKSGGYRVLLPLLF-N 190
            :..||:.|.|:|  .:|..:||:...::..::  ||    |::     ::......|:..::| |
Mouse   128 VNTLRNLGMGKR--TIENKVQEEAQWLMKELKKTNGSPCDPQF-----IIGCAPCNVICSIVFQN 185

  Fly   191 PFSANAHFYI----VYNECLSREEMGKLVKLCQMGIQFQRNADDYGKMLSIIPWIRHIWPEWSGY 251
            .|......::    ..|||..        .|...|.|          :.:.:|.:....|  ..:
Mouse   186 RFDYKDKDFLSLIGKVNECTE--------ILSSPGCQ----------IFNAVPILIDYCP--GSH 230

  Fly   252 NKLNESNLFVRQFFADFVDKYLDSYEEGVERNFMDVYIAEMRRGPG---YGFNRDQLIMGLVDFS 313
            |||.:::.:::.:....:.::.:|.:....|:|:|.::.:.|:..|   ..:..:.|...:.|..
Mouse   231 NKLFKNHTWIKSYLLGKIKEHEESLDVTNPRDFIDYFLIQRRQKNGIEHMDYTIEHLATLVTDLV 295

  Fly   314 FPAFTAIGVQLSLLVQYLMLYPAVLRRVQNEIDEVVGCGRLPNLEDRKNLPFTEATIREGLRIET 378
            |.....:...:...:..||.:..:..:||.|||.|:|..|.|.::||.::|:|.|.:.|..|...
Mouse   296 FGGTETLSSTMRFALLLLMKHTHITAKVQEEIDNVIGRHRSPCMQDRNHMPYTNAMVHEVQRYID 360

  Fly   379 LVPSDVPHKALEDTELLGYRIPKDTIVVPSLYAFHSDARIWSDPEQFRPERFLDADGKLCLKLDV 443
            |.|:.|.|:...||:...|.|||.|.|:.||.:...|:..:.:||.|.|..|||.:|.. .|.|.
Mouse   361 LGPNGVVHEVTCDTKFRNYFIPKGTQVMTSLTSVLHDSTEFPNPEVFDPGHFLDDNGNF-KKSDY 424

  Fly   444 SLPFGAGKRLCAGETFARNMLFLVTATMCQHFDF--VLGPNDRLPDLSQNLNGLIISPPDF 502
            .:||.||||:|.||:.||..|||...|:.|:|..  ::.|.|  .|::...:|....||:|
Mouse   425 FVPFSAGKRICVGESLARMELFLFLTTILQNFKLKPLVDPKD--IDMTPKHSGFSKIPPNF 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp304a1NP_731751.1 p450 30..504 CDD:278495 133/491 (27%)
Cyp2c40NP_034134.3 p450 30..487 CDD:333810 133/491 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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