DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-Vb and clmp

DIOPT Version :9

Sequence 1:NP_001262511.1 Gene:beat-Vb / 41583 FlyBaseID:FBgn0038092 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_001008177.1 Gene:clmp / 493539 XenbaseID:XB-GENE-973667 Length:332 Species:Xenopus tropicalis


Alignment Length:202 Identity:44/202 - (21%)
Similarity:76/202 - (37%) Gaps:56/202 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LGRWLLQLGVHMLLVVRRIQCLRVTDINVPQIVDFRDNVTLSCSYDISGH----TLNSVKWYKN- 62
            ||.|.: ||           .|..|:|.:  :.|  :||||.|.:.: ||    :|: ::|..| 
 Frog     9 LGLWYV-LG-----------ALAQTEIKL--VAD--ENVTLPCRHSL-GHLGIQSLD-IEWLSNI 55

  Fly    63 ---GKEFFRYSPLTPPTYIPFAVEGVQLIDDGNECN---------ESSCRVELNLLGVKSSGVYR 115
               ||:            :..:..|.|:.:..|...         |....:.:..|....:|.|.
 Frog    56 SDHGKQ------------VLLSYSGGQVYNAENHKGRYSFVSKYLEGDASLFIRSLQPSDAGQYI 108

  Fly   116 CEVSGDAPHFQLTARDANMTVEALPQNNPLISSFHSTYRFNDFVEVNCSTDFSSLFTRITWYVNG 180
            |:|. :|..:|.:.    :||..|.:.:.|..|..........|.:||.:...:......|    
 Frog   109 CKVK-NAGQYQWSF----ITVIVLVKPSELACSSEGAQLEGKNVTLNCKSTAGTKPLNYRW---- 164

  Fly   181 IKVSLVD 187
            ::|:|.|
 Frog   165 VRVNLKD 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-VbNP_001262511.1 IG_like 39..121 CDD:214653 21/98 (21%)
Ig 41..130 CDD:143165 22/105 (21%)
clmpNP_001008177.1 V-set 29..127 CDD:369466 25/116 (22%)
Ig_3 136..208 CDD:372822 8/40 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 276..332
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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