DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10909 and pclob

DIOPT Version :9

Sequence 1:NP_650236.1 Gene:CG10909 / 41581 FlyBaseID:FBgn0038090 Length:349 Species:Drosophila melanogaster
Sequence 2:XP_009291733.1 Gene:pclob / 565842 ZFINID:ZDB-GENE-030131-8100 Length:9355 Species:Danio rerio


Alignment Length:305 Identity:68/305 - (22%)
Similarity:106/305 - (34%) Gaps:83/305 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RSPPSSTLEEEVPG-KTIHPEDPKITSKNFENP-----TKETSIQSPIKNSIKPS---------- 58
            :|.|:||..:|..| ..:.|..|.....|.|.|     .|||..::|...|...|          
Zfish  2545 QSKPTSTPTQEQKGPPDVQPSKPLEAELNKEPPKSCPLCKETLKKTPQNYSSCTSCKSIVCNLCG 2609

  Fly    59 WNPEPKITRTSIW-----DIESAGGDSI-QNDCQSECNVEDQGHEQEVTLETRIF-------SGT 110
            :||.|..|....|     .:....|..: |.:.||...:......:|   :|::.       |.|
Zfish  2610 FNPNPHQTDVKEWLCLTCQMHKTSGPPLPQPEPQSNIALAPASPLKE---KTQVSPSPEKKPSVT 2671

  Fly   111 SDRIEPHRHYGVYLLRNRFDAIQLLTRNTSSSADDYGERRVI-----SEYREMRCEF-------R 163
            :|:.:          :...:..:|.|.||..|..|....:.:     .:.:|....|       |
Zfish  2672 ADQDK----------KPLAETKELKTPNTQKSKGDVPSSKPVPPPKGEQVKEESSFFGFGFGSSR 2726

  Fly   164 VWSPFQSKLAAGIMGGVSDLHLQIGSKVLYLGAGFGRSVSH-ISDIVGDSGMVYAVEQIPWAGRQ 227
            ..||..|..||     |||       ||...|:.|..|.|: ||..|.|..   :.:..|.:.:.
Zfish  2727 SRSPSPSPQAA-----VSD-------KVFGFGSSFLSSASNLISSAVQDES---STKTPPTSRKG 2776

  Fly   228 LTIM-----------ANRRSNIVPIVEDATMPYKYRYEVPACIDI 261
            .|:.           .:|:.:::|  :||......|...||...|
Zfish  2777 STVSQVSNKTTPTPPTSRKGSVIP--QDAKQKQPQRESKPAVSSI 2819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10909NP_650236.1 Fibrillarin 114..344 CDD:279593 37/172 (22%)
pclobXP_009291733.1 DNA_pol3_gamma3 <35..208 CDD:331207
zf-piccolo 218..275 CDD:310374
zf-piccolo 512..567 CDD:310374
zf-piccolo 798..853 CDD:310374
zf-piccolo 1068..1122 CDD:310374
zf-piccolo 1336..1390 CDD:310374
zf-piccolo 1609..1660 CDD:310374
Herpes_ICP4_C 1746..>2029 CDD:332854
zf-piccolo 2057..2111 CDD:310374
zf-piccolo 2315..2369 CDD:310374
DUF4045 <2372..2688 CDD:330572 32/155 (21%)
zf-piccolo 2578..2629 CDD:310374 11/50 (22%)
zf-piccolo 2845..2899 CDD:310374
TOP2c <2885..3106 CDD:330395
zf-piccolo 3106..3160 CDD:310374
zf-piccolo 3399..3457 CDD:310374
Atrophin-1 <3483..4034 CDD:331285
zf-piccolo 3729..3786 CDD:310374
zf-piccolo 4063..4120 CDD:310374
zf-piccolo 4395..4452 CDD:310374
Atrophin-1 <4460..5042 CDD:331285
zf-piccolo 4732..4789 CDD:310374
zf-piccolo 5090..5147 CDD:310374
RNase_E_G <5155..5304 CDD:331378
Neuromodulin_N <5320..>5731 CDD:331332
Atrophin-1 <6000..6417 CDD:331285
ERM <7511..>7597 CDD:330563
PDZ_signaling 8690..8781 CDD:238492
C2A_RIM1alpha 8887..9021 CDD:175997
C2 9236..9346 CDD:326325
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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