Protein Alignment d-cup and cib1

DIOPT Version :10

• Sequence 1: NP_650235.1
• Gene: d-cup / 41580
• FlyBaseID: FBgn0038089
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: NP_001017681.1
• Gene: cib1 / 550376
• ZFINID: ZDB-GENE-050417-170
• Length: 188
• Species: Danio rerio
• Alignment Length: 184
• Identity: 35/184 - (19%)
• Similarity: 82/184 - (44%)
• Gaps: 26/184 - (14%)

  Fly    20 GGLVPQIARLVPFNDSEVTC-----ILMIYYKYS----LQNGPSARRITSSQFVNIVIGFQQLYD 75
            ||...::.:.:.....|:|.     ||:.:.::|    .:|||.:.|::..:    ::...:|..
Zfish     2 GGTASKLPKELLSEYQELTFLTKQEILLAHKRFSELQGRENGPYSSRVSMEK----ILTLPELKS 62

  Fly    76 MDVVDRIVTLIAGGRKHVTPMEFVNYMTILM----SRDMERKMEFAYMVYDKNGMGI--NREIIS 134
            .....||..:.:........:.|.:::.:|.    |..:|.|..:|:.::|.:..|.  .|::
Zfish    63 NPFRKRICHVFSTSDLRDGSLTFEDFLDLLSAFSDSATLEIKSHYAFRIFDFDDDGTLDGRDL-- 125

  Fly   135 SSVERFFVGDDDEVL----EMRLDMVDFLLLKFDEDQDGYISFEEYRSIVLQQP 184
            ..:.....|:.|:..    ||| .::..:|.:.|.|:||.::..|::.::.:.|
Zfish   126 EKLVNCLTGETDDTRLTAEEMR-QLISNILEESDIDKDGTVNPSEFQHVISRSP 178

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
d-cup	NP_650235.1	FRQ1	70..182	CDD:444056	23/121 (19%)
cib1	NP_001017681.1	EFh	108..175	CDD:238008	15/69 (22%)