DRSC/TRiP Functional Genomics Resources

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Protein Alignment d-cup and HPCAL4

DIOPT Version :10

Sequence 1:NP_650235.1 Gene:d-cup / 41580 FlyBaseID:FBgn0038089 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_057341.1 Gene:HPCAL4 / 51440 HGNCID:18212 Length:191 Species:Homo sapiens


Alignment Length:135 Identity:24/135 - (17%)
Similarity:50/135 - (37%) Gaps:48/135 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   419 DVSINVAASEMPTFNSLYNCKPGDRMYVAPENYCKTLNMDIDVEE----YKSQKIENDDLF---V 476
            :::.:.:.:.:|.|....:...|.|:|...:.:..|..:.:.:|:    |:.:::.|  :|   :
Human    15 ELTFHTSETRVPFFKGYASVLSGKRLYQELQTFNATAEVKVALEKIQGCYREERLRN--IFLEPI 77

  Fly   477 LTHFMDVLEDTAVELDAANITTFEGKLFDITVEEVEEQEESKEGSAESSSSSSSESDEESSVERE 541
            |..|.:.:                          |..||          |.|:.|.|..||:   
Human    78 LRQFSEAM--------------------------VSSQE----------SQSNYEVDNISSI--- 103

  Fly   542 LDEVS 546
            ||.:|
Human   104 LDYIS 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
d-cupNP_650235.1 FRQ1 70..182 CDD:444056
HPCAL4NP_057341.1 FRQ1 21..177 CDD:444056 24/129 (19%)
Blue background indicates that the domain is not in the aligned region.

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