Protein Alignment d-cup and elm

DIOPT Version :10

• Sequence 1: NP_650235.1
• Gene: d-cup / 41580
• FlyBaseID: FBgn0038089
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: NP_649568.1
• Gene: elm / 40695
• FlyBaseID: FBgn0037358
• Length: 189
• Species: Drosophila melanogaster
• Alignment Length: 182
• Identity: 40/182 - (21%)
• Similarity: 73/182 - (40%)
• Gaps: 54/182 - (29%)

  Fly     9 DRFNQRFQSV----YGGL-------VPQIARLVPFNDSEVTCILMIYYKYSLQNGPSARRITSSQ 62
            :|...||.|:    .|.|       :|::| :.|.      |..:::..::..|..   |:...|
  Fly    29 ERLYSRFTSLDRNDCGTLSREDLMRIPELA-INPL------CERIVHSFFAESNDD---RVNFRQ 83

  Fly    63 FVNIVIGFQQLYDMDVVDRIVTLIAGGRKHVTPMEFVNYMTILMSRDMERKMEFAYMVYDKNGMG 127
            |:|::..|:.|.|                        |..:.|.||  |.|::||:.:||.:..|
  Fly    84 FMNVLAHFRPLRD------------------------NKQSKLNSR--EEKLKFAFKMYDLDDDG 122

  Fly   128 INREIISSSVERFFVG---DDDEVLEMRLDMVDFLLLKFDEDQDGYISFEEY 176
            :.......|:....||   ..|::    :.:.:..:|:.|....|.||||::
  Fly   123 VISRDELLSILHMMVGANISQDQL----VSIAERTILEADLCCQGKISFEDF 170

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
d-cup	NP_650235.1	FRQ1	70..182	CDD:444056	25/110 (23%)
elm	NP_649568.1	FRQ1	27..174	CDD:444056	40/182 (22%)