DRSC/TRiP Functional Genomics Resources

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Protein Alignment d-cup and Frq2

DIOPT Version :10

Sequence 1:NP_650235.1 Gene:d-cup / 41580 FlyBaseID:FBgn0038089 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_525093.1 Gene:Frq2 / 32799 FlyBaseID:FBgn0083228 Length:187 Species:Drosophila melanogaster


Alignment Length:102 Identity:26/102 - (25%)
Similarity:54/102 - (52%) Gaps:11/102 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 EFVNYMTILMSRDMERKMEFAYMVYDKNGMG-INREIISSSVERFF--VG-----DDDEVLEMRL 153
            ||:..::|....:::.|:.:|:.:||.:..| |.||.:.:.|:..:  ||     :|:...:.| 
  Fly    84 EFIRALSITSRGNLDEKLHWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQQPQTEDENTPQKR- 147

  Fly   154 DMVDFLLLKFDEDQDGYISFEEYRSIVLQQPRLLEFL 190
              ||.:..:.|::.|..::.||:|......||:::.|
  Fly   148 --VDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQAL 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
d-cupNP_650235.1 FRQ1 70..182 CDD:444056 23/92 (25%)
Frq2NP_525093.1 FRQ1 <69..173 CDD:444056 23/91 (25%)

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