Protein Alignment d-cup and Chp2

DIOPT Version :10

• Sequence 1: NP_650235.1
• Gene: d-cup / 41580
• FlyBaseID: FBgn0038089
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: XP_038934165.1
• Gene: Chp2 / 308965
• RGDID: 727796
• Length: 252
• Species: Rattus norvegicus
• Alignment Length: 208
• Identity: 47/208 - (22%)
• Similarity: 76/208 - (36%)
• Gaps: 81/208 - (38%)

  Fly    16 QSVYGGLVP---QIARLVPFNDSEVTCILMIYYKY--------------------SLQNGPSARR 57
            :|.:..|:|   ||.|...|:.:.   :|.:|:::                    :|...|...|
  Rat    60 RSSHVALIPDVDQIRRETGFSQAS---LLRLYHRFQALDREEKGFLSRLDLQQIGALAVNPLGDR 121

  Fly    58 ITSSQFVNIVIGFQQLYDMDVVDRIVTLIAGGRKHVTPMEFVNYMTIL-----------MSRDME 111
            |..|.|.|   |.|::|                       |..:..:|           ..||.:
  Rat   122 IIDSFFPN---GSQRVY-----------------------FAGFARVLAYFRPIDEDDATLRDPK 160

  Fly   112 R---------KMEFAYMVY--DKNGMGINREIISSSVERFFVGDD--DEVLEMRLDMVDFLLLKF 163
            :         |:.||:.:|  |::|.....|::  .|.|..||..  ||.||   .:.|..:.:.
  Rat   161 QPEPLNSRMNKLRFAFQLYDLDRDGKISRNEML--QVLRLMVGVQVTDEQLE---SITDRTVQEA 220

  Fly   164 DEDQDGYISFEEY 176
            |||.||.:||.|:
  Rat   221 DEDGDGAVSFLEF 233

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
d-cup	NP_650235.1	FRQ1	70..182	CDD:444056	30/131 (23%)
Chp2	XP_038934165.1	FRQ1	86..240	CDD:444056	39/179 (22%)