DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10126 and trioa

DIOPT Version :9

Sequence 1:NP_788664.2 Gene:CG10126 / 41579 FlyBaseID:FBgn0038088 Length:227 Species:Drosophila melanogaster
Sequence 2:XP_021323750.1 Gene:trioa / 557667 ZFINID:ZDB-GENE-060503-334 Length:3115 Species:Danio rerio


Alignment Length:250 Identity:52/250 - (20%)
Similarity:93/250 - (37%) Gaps:66/250 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 REIRTKGWSLK--NPN-----------------CD---LYTLEANMASQALRELT-DGEDKDPIT 45
            ||..|...|:|  |||                 ||   ..||...:..:....:| .|.::..:|
Zfish  2680 REGLTNKVSVKLLNPNYIYDVLPEFLVPLSDVTCDKGECVTLRCKVCGRPKATVTWKGPEQKTLT 2744

  Fly    46 KLRLLCLSRGATG-----ILGL------GRAFRAMDDDGSKALNEEEFITGIRDTGLDVS-EEEI 98
            ......::...||     |:|:      .....|.:|.||.|.:....:.|....|:.|. ::..
Zfish  2745 NNGHFSIAYSETGEATLRIVGVTSEDDGSYTCIATNDIGSVASSASLRVLGTTSDGIRVMWKDNF 2809

  Fly    99 KQMFATFDEDGSGSINMTEFLLKLRPPMPQSRLNIIDQAFNK--MDRDEDGVIT-----IQDLKN 156
            :..:....|.|.|..::.:     |.....|:..:..:..||  |.||:   :|     :|.|::
Zfish  2810 ESFYTEVAELGRGRFSVVK-----RCDQRGSKRTVAVKFVNKKLMKRDQ---VTHEFSVLQRLQH 2866

  Fly   157 VYSVKEHPKYQSG-------EKSEDEILTDFLHNFEGGRGNLDGKITREEFVNYY 204
            .:.|:....:::.       |.|:...|.|::.::    |||     .||.|.:|
Zfish  2867 PHLVRLLDTFETSSSYALVLEMSDQGRLLDYIVSW----GNL-----TEEKVAFY 2912

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10126NP_788664.2 EF-hand_7 62..119 CDD:290234 11/63 (17%)
EFh 64..119 CDD:238008 11/55 (20%)
EFh 97..154 CDD:238008 12/63 (19%)
EF-hand_7 98..158 CDD:290234 13/66 (20%)
EF-hand_7 134..204 CDD:290234 19/83 (23%)
trioaXP_021323750.1 SEC14 61..199 CDD:214706
SPEC 212..447 CDD:238103
SPEC 343..589 CDD:238103
SPEC 590..806 CDD:238103
SPEC 810..1037 CDD:238103
SPEC 931..1160 CDD:238103
SPEC 1166..1266 CDD:197544
RhoGEF 1316..1488 CDD:238091
PH1_Kalirin_Trio_like 1495..1627 CDD:270060
SH3_Kalirin_1 1695..1754 CDD:212786
SH3-RhoG_link 1752..2000 CDD:318750
RhoGEF 2007..2180 CDD:238091
PH2_Kalirin_Trio_p63RhoGEF 2185..2324 CDD:270061
Atrophin-1 <2364..2523 CDD:331285
SH3_Kalirin_2 2570..2628 CDD:212787
I-set 2702..2793 CDD:254352 16/90 (18%)
PKc_like 2805..3067 CDD:328722 24/124 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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