DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10126 and Trio

DIOPT Version :9

Sequence 1:NP_788664.2 Gene:CG10126 / 41579 FlyBaseID:FBgn0038088 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_001074771.1 Gene:Trio / 223435 MGIID:1927230 Length:3103 Species:Mus musculus


Alignment Length:260 Identity:56/260 - (21%)
Similarity:81/260 - (31%) Gaps:101/260 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FLREIRTKGWSLKNPNCDLYTLEANMASQALRELTDGEDKDPITKLRLLCLSRGATGILGLGRAF 66
            |.::.||...|.|      :..|.||.|  |..||...|...:|.                    
Mouse   164 FWQKQRTNFGSSK------FEFETNMVS--LEGLTKVVDPSQLTP-------------------- 200

  Fly    67 RAMDDDGSKALNEEEFITGIRDTGLDVSEEEIKQMFATFDEDGSGSINMTEFLLKLRPPMPQSRL 131
               :.||....|.||:|             ||:   ..|:|..|.:.:|...|.:|:..:.:..|
Mouse   201 ---EFDGCLEYNHEEWI-------------EIR---VAFEEYISNAAHMLSRLEELQDVLAKKEL 246

  Fly   132 --------NIID---QAFNKM------DRDEDGVITIQDLKNVYSVKEHPKYQSGEKSED----- 174
                    |:||   |...|:      |.|.:|...:|   .:.|....||..||..:.|     
Mouse   247 PQDLEGARNMIDEHSQLKKKVIKAPIEDLDLEGQKLLQ---RIQSSDSFPKKNSGSGNADLQNLL 308

  Fly   175 ---EILTDFLHN------------------------FEGGRGNLDGKITREE--FVNYYATISAS 210
               ..:.|.||:                        ||.....:...||..:  |:|.|..|..|
Mouse   309 PKVSTMLDRLHSTRQHLHQMWHVRKLKLDQCFQLRLFEQDAEKMFDWITHNKGLFLNSYTEIGTS 373

  Fly   211  210
            Mouse   374  373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10126NP_788664.2 EF-hand_7 62..119 CDD:290234 12/56 (21%)
EFh 64..119 CDD:238008 12/54 (22%)
EFh 97..154 CDD:238008 18/73 (25%)
EF-hand_7 98..158 CDD:290234 17/76 (22%)
EF-hand_7 134..204 CDD:290234 23/112 (21%)
TrioNP_001074771.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
SEC14 69..204 CDD:214706 14/70 (20%)
Spectrin 1 218..338 25/122 (20%)
SPEC 220..445 CDD:238103 34/157 (22%)
Spectrin 2 340..446 9/34 (26%)
SPEC 341..566 CDD:238103 9/33 (27%)
Spectrin 3 566..672
SPEC 567..783 CDD:238103
Spectrin 4 673..784
SPEC 787..1014 CDD:238103
Spectrin 5 907..1012
SPEC 908..1137 CDD:238103
Spectrin 6 1138..1244
SPEC 1143..1243 CDD:197544
RhoGEF 1295..1465 CDD:238091
PH1_Kalirin_Trio_like 1472..1594 CDD:270060
PH 1505..1590 CDD:278594
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1601..1651
SH3_Kalirin_1 1659..1718 CDD:212786
SH3-RhoG_link 1715..1972 CDD:293215
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1781..1906
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1927..1957
RhoGEF 1970..2143 CDD:238091
PH2_Kalirin_Trio_p63RhoGEF 2148..2286 CDD:270061
PH 2175..2271 CDD:278594
SH3_Kalirin_2 2559..2617 CDD:212787
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2643..2666
I-set 2689..2780 CDD:254352
Ig 2703..2780 CDD:299845
STKc_Trio_C 2792..3054 CDD:271015
S_TKc 2800..3054 CDD:214567
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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