DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-Va and beat-Ib

DIOPT Version :10

Sequence 1:NP_650233.3 Gene:beat-Va / 41578 FlyBaseID:FBgn0038087 Length:300 Species:Drosophila melanogaster
Sequence 2:NP_523579.1 Gene:beat-Ib / 34939 FlyBaseID:FBgn0028645 Length:327 Species:Drosophila melanogaster


Alignment Length:292 Identity:83/292 - (28%)
Similarity:129/292 - (44%) Gaps:44/292 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MFLFIALLI-DYP-IAYALFVTDISVPEIVDFRDNVTLSCSYDMRGHTLNSVKWYKDHEEFFRYS 69
            :|:..|:.| ..| :...|...::.:|..|...||..|.|:||:...||.:||||:...||:||:
  Fly    11 LFIITAIYIASLPGLTVGLRNVNVRIPSAVKRGDNALLICNYDIENDTLYTVKWYRGRREFYRYT 75

  Fly    70 PLTSPIYMTF------DVAGLQVLEGKYVCNESSCRLDLSLQGAKSTGLYKCEVSGDAPHFKLAD 128
            |..:|.:..|      ||...|         .::..:.|.......:|.:.||||.|||.|..:.
  Fly    76 PKENPAWKIFTKTNEIDVETAQ---------SNASHVLLRNVPTSISGKFACEVSADAPTFDTSI 131

  Fly   129 KADNMTVAALPQNDPLIESFNSMYRMEEYLKATCISDFSSLPTRLTWYINGEQ--PLLGELYPTT 191
            .|.:|.|..||...|:|...:|.||:.:.:...|.||:|.....|||:||..|  |....:| ..
  Fly   132 VAADMEVVELPTQRPIITGIHSRYRLGDVINGNCSSDYSKPAANLTWWINDIQVPPNYLRIY-DI 195

  Fly   192 DTSLAAHDYVLRRQRLQVQFFLQGQRFFQAGKILELKCVAEIENYPELRREKTL----------- 245
            ...:|.|   |....|:::|.:....|.::.  |:|||.|.|........||.:           
  Fly   196 QRHVAEH---LESAVLEIKFVVTVHHFIKSR--LKLKCSARIHEIYAQESEKLIEEDRPRILASG 255

  Fly   246 -SASLSQYD-------NFNNQMPLRHANANSG 269
             |..::.|.       :.:|::.|.|:||..|
  Fly   256 RSPDMNMYPFDQPGDADEHNELFLIHSNAACG 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-VaNP_650233.3 None
beat-IbNP_523579.1 Ig 144..>182 CDD:472250 13/37 (35%)
Ig strand B 161..165 CDD:409353 0/3 (0%)
Ig strand C 175..179 CDD:409353 2/3 (67%)

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