DRSC/TRiP Functional Genomics Resources

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Protein Alignment PolQ and tam

DIOPT Version :10

Sequence 1:NP_524333.1 Gene:PolQ / 41571 FlyBaseID:FBgn0002905 Length:2059 Species:Drosophila melanogaster
Sequence 2:XP_061513323.1 Gene:tam / 1272128 VectorBaseID:AGAMI1_013818 Length:1168 Species:Anopheles gambiae


Alignment Length:1028 Identity:194/1028 - (18%)
Similarity:316/1028 - (30%) Gaps:371/1028 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1150 QGSQIEKMKINPATVVCSPQLANEEKPSTSQSARRKLVNEGMAERRRVALMKIQQRTQKENQSKD 1214
            :|.::.:|.|.    :.|..|..:....|:|..|....:..:.:..|..|::             
Mosquito    51 RGPRLNEMSIQ----MLSDSLYRQIFRPTAQHGRHAPASPTLVKSLRDDLLR------------- 98

  Fly  1215 QPIQASRSNQLSSPVNRTPANRWTQSENPNNEMNNSQL-PRRNPRNQSP--VPNANRTASR---- 1272
            ..|.||....|.....:.|..|....|...:.:...|. |.|....|.|  .||..:..||    
Mosquito    99 HGIDASSPALLPDVDVKLPPLRGANIEEHFHSIAEEQSEPYRRAIEQLPGAPPNPPKVWSRTAGW 163

  Fly  1273 ----KVSNAEEDLFMADDSFML-----------------NTGLAAALTAAESKIASCTEADVIPS 1316
                .|:.:...:...||..::                 .||.|....:..|.:.|..||  .|:
Mosquito   164 TRYDPVTGSASSIPFPDDPALVFDVEVCVRAGPLPVMATATGTAGCWYSWTSPLLSSGEA--APT 226

  Fly  1317 SQPKEPEVIGALTPHASRLKRSDQLRSQRIQSPSPTPQREIEIDLESKNESNGVSSMEISDMSME 1381
            .|......:..|.|               :::.:||.:|                        :.
Mosquito   227 DQTAADYRLSQLIP---------------LEADTPTDER------------------------LH 252

  Fly  1382 NPLMKNPLHLNASH----IMSCSKVDETASSFSSIDIIDVC-GHRNAFQAAIIEINN---ATRLG 1438
            .|  :..:..|||:    :.....|:.||..|.....:.|| ....::|.|:::.:.   |...|
Mosquito   253 RP--RVVIGHNASYDRARVREQYWVEPTALRFLDTMSLHVCVSGITSYQRAMLKSSKQLPAEDAG 315

  Fly  1439 FSVGLQAQAGKQKPLIGSNLLINQVAAAENREAAARERVLFQVDDT------NFISGVSFCLAD- 1496
            :|        :|..|  :||.............|..:|..| |:.|      :|.|.:|:|.|| 
Mosquito   316 WS--------EQSSL--NNLADVYALYCGGPPLAKSQRDTF-VEGTLQDVRADFDSLMSYCAADV 369

  Fly  1497 ------------------------------NVAYY-----WNMQIDER-AAYQGVPTPLK----- 1520
                                          ..||.     |...:.|. .|::.:....|     
Mosquito   370 RATGAVLQRLWPLFRERFPHPATLAGMLEMGSAYLPVNGNWTRYLTEADLAFEDLDLEAKHLLAQ 434

  Fly  1521 -VQELCNLM----ARKDLTLVMHDGKEQLKMLRKAIPQLKRISAKLE-------DAKVANWLLQP 1573
             .:..|.|:    .|:||.|...|.         ::.:||..:||:|       .:|....|...
Mosquito   435 RAEAACGLLHDAAYRRDLWLWDQDW---------SVQELKLKAAKVEGRKGKEPGSKAEEPLAGG 490

  Fly  1574 DKTVNFLN----------------------------MCQ--TFAPECTGLANLCGSGRGYSSYGL 1608
            |:....:|                            :|.  |....|.|     .||:      |
Mosquito   491 DEQTRLVNKFAHLYATASRLPVRRPLLPGYPAWYRALCSKPTAGDWCPG-----PSGK------L 544

  Fly  1609 DTSSAILPRIRTAIESCVTLHILQGQTENLSRIGNGDLL--KFFHDIEMPIQLTLCQMELVGFPA 1671
            .|...|.|::.:.......||.::|.       |.|.|:  |:..|.|              |.|
Mosquito   545 GTGMQIAPKLLSLCWEGYPLHYIRGH-------GWGFLVPFKYARDEE--------------FEA 588

  Fly  1672 QKQRLQQLYQRMVAVMKKVETKIYEQHGSRFNLGSSQAVAKVLGLH------------RKAKGRV 1724
            ....|.  .:::||....||.|    |.:.....|::|:|: |..|            |||....
Mosquito   589 DGAALP--LEQLVAACPVVEPK----HAAATPAESTEALAQ-LAKHVEQTISRKDYYRRKASDAS 646

  Fly  1725 TTSRQV----------LE----------------KLNSPISHLILGYRKLS-GLLA---KSIQPL 1759
            .|....          ||                ::.:|:|...|.  |.| .:||   ::.:.:
Mosquito   647 RTPAPYTGSGVWCNVELEGCCYFLKLPHKDGGGHRVGNPLSKDFLA--KFSENVLAGDGRAAERV 709

  Fly  1760 MECCQ--------ADRIHGQSITYTATGRISMTEPNLQNVAKEFSIQVGSDVVH-ISC----RSP 1811
            :|..:        .|||.||.:.:...|     ||:          .:|:.:.. :.|    |..
Mosquito   710 VEIARMLSYWRNNRDRIRGQLVVWCRPG-----EPD----------PIGAIIPQVVVCGTLTRRA 759

  Fly  1812 FMPTDESRCLLSADFCQLEMRILAHMSQDKALLEVMKSSQDLFIA-------IAAH------WNK 1863
            ..||..:......:....|:|.:........|:.....||:|:||       ...|      |..
Mosquito   760 MEPTWMTASNAQRERVGSELRAMVQAPPGYRLVGADVDSQELWIASVLGDAGTGLHGGTPFGWMT 824

  Fly  1864 IEESEVTQ-DLRNSTKQVC-----------YGIVYGMGMRSLAESLNCSEQEARMISDQFHQAYK 1916
            :..::.|: |:.:.|.|..           |..:||.|           :|.|..:..||:....
Mosquito   825 LSGTKATRTDMHSVTAQAVGISRDHAKVLNYARIYGAG-----------QQFAERLLKQFNPTLT 878

  Fly  1917 GIRDYTTRVVNFARSKGF-VETIT-GRRRYLENINSDVEHLKNQAERQAVNST 1967
            |..         ||||.. :.|:| |||.|...     |.|::|...|...||
Mosquito   879 GAE---------ARSKATKMFTLTKGRRTYRLR-----EELRDQYPTQPARST 917

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PolQNP_524333.1 BRR2 216..779 CDD:440817
DNA_pol_A_theta 1668..2053 CDD:176475 80/382 (21%)
tamXP_061513323.1 None
Blue background indicates that the domain is not in the aligned region.

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