DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DNApol-theta and HELQ

DIOPT Version :9

Sequence 1:NP_524333.1 Gene:DNApol-theta / 41571 FlyBaseID:FBgn0002905 Length:2059 Species:Drosophila melanogaster
Sequence 2:NP_598375.3 Gene:HELQ / 113510 HGNCID:18536 Length:1101 Species:Homo sapiens


Alignment Length:1120 Identity:337/1120 - (30%)
Similarity:540/1120 - (48%) Gaps:179/1120 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FGNSTLMAL--------EKGMQADDKENAQPGNGNIQVQS------------AGNEVNSEI---- 49
            ||..|...|        |:.|.|:::.....|...::||.            .|.:.|.::    
Human    26 FGAPTAAELVPGDEGKEEEEMVAENRRRKTAGVLPVEVQPLLLSDSPECLVLGGGDTNPDLLRHM 90

  Fly    50 --------QEINSE--FFRDEFSYEVNQAHKPAEQSVVNVSQVQQHMAVVSNQDSEDQSRSSALN 104
                    |..:||  .|.|..|:..|......:.......|:.:|....::..:|:....|..|
Human    91 PTDRGVGDQPNDSEVDMFGDYDSFTENSFIAQVDDLEQKYMQLPEHKKHATDFATENLCSESIKN 155

  Fly   105 DQICT----------------QSSFEGE--DAGADAVLDQP--------NLDENSFLCPAQDEEA 143
            ....|                ||.:||.  :.|||.:.|.|        ||..:|      ::..
Human   156 KLSITTIGNLTELQTDKHTENQSGYEGVTIEPGADLLYDVPSSQAIYFENLQNSS------NDLG 214

  Fly   144 SEQLKED--ILHSHSVLAKQEFYQEISQVTQNLSSMSPNQLRVSPNSSR-------IREAMP--E 197
            ...:||.  ...||:.:.::..:..|.|..||..|.|  ::|.|.:.:|       ::.||.  .
Human   215 DHSMKERDWKSSSHNTVNEELPHNCIEQPQQNDESSS--KVRTSSDMNRRKSIKDHLKNAMTGNA 277

  Fly   198 RPAMPL--------------DLN----TLRSIS-----AWNLPMSIQAEYKK-KGVVDMFDWQVE 238
            :...|:              ::|    |:.|.|     .::||..::..|.: ||:..:::||..
Human   278 KAQTPIFSRSKQLKDTLLSEEINVAKKTVESSSNDLGPFYSLPSKVRDLYAQFKGIEKLYEWQHT 342

  Fly   239 CLSKPRLLFEHCNLVYSAPTSAGKTLVSEILMLKTVLERGKKVLLILPFISVVREKMFYMQDLLT 303
            ||:. ..:.|..||:||.|||.|||||:|||||:.:|...|.||:|||::::|:||:..:.....
Human   343 CLTL-NSVQERKNLIYSLPTSGGKTLVAEILMLQELLCCRKDVLMILPYVAIVQEKISGLSSFGI 406

  Fly   304 PAGYRVE---GFYGGYTPPGGFESLHVAICTIEKANSIVNKLMEQGKLETIGMVVVDEVHLISDK 365
            ..|:.||   |..|.:.|....|...:.|.||||.:|:||.|:|.|:::::|:|||||:|:|.:.
Human   407 ELGFFVEEYAGSKGRFPPTKRREKKSLYIATIEKGHSLVNSLIETGRIDSLGLVVVDELHMIGEG 471

  Fly   366 GRGYILELLLAKILYMSRRNGLQIQVITMSATLENVQLLQSWLDAELYITNYRPVALKEMIKVGT 430
            .||..||:.||||||.|:..    |:|.|||||.||:.||.:|.||.|.:.:|||.|||.:|:..
Human   472 SRGATLEMTLAKILYTSKTT----QIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKIND 532

  Fly   431 VIYDHRLKLVRDVAKQKVL-------LKGLENDSDDVALLCIETLLEGCSVIVFCPSKDWCENLA 488
            .||:...|....:...::|       ||.:  |.|.:..|..| ::...|.:||||||..|||:|
Human   533 TIYEVDSKAENGMTFSRLLNYKYSDTLKKM--DPDHLVALVTE-VIPNYSCLVFCPSKKNCENVA 594

  Fly   489 VQLATAIHVQIKSETVLGQRLRTNLNPRAIAEVKQQLRDIPTG-LDGVMSKAITYACAFHHAGLT 552
            ..:.     :..|:..|..:.:..      .||.:.|::|..| |..|:.:.|.:..|:||:|||
Human   595 EMIC-----KFLSKEYLKHKEKEK------CEVIKNLKNIGNGNLCPVLKRTIPFGVAYHHSGLT 648

  Fly   553 TEERDIIEASFKAGALKVLVATSTLSSGVNLPARRVLIRSPLFGGKQMSSLTYRQMIGRAGRMGK 617
            ::||.::|.::..|.|.:...||||::|||||||||::|:|....:.:....|:||||||||.|.
Human   649 SDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAGRAGI 713

  Fly   618 DTLGESILICNEINARMGRDLVVSELQPITSCLDMDGSTHLKRALLEVISSGVANTKEDIDFFVN 682
            ||:||||||..|.:.:...:|:...|:...|.|..:.:..::...|.:|...:|...:||..|:|
Human   714 DTIGESILILQEKDKQQVLELITKPLENCYSHLVQEFTKGIQTLFLSLIGLKIATNLDDIYHFMN 778

  Fly   683 CTLLSAQKAFHAKEKPPDEESDANYINDALDFLVEYEFVR---LQRNEERETAVYVATRLGAACL 744
            .|....|:....|||     |......::|.:|.|...::   :.::||.....:..|:||.|..
Human   779 GTFFGVQQKVLLKEK-----SLWEITVESLRYLTEKGLLQKDTIYKSEEEVQYNFHITKLGRASF 838

  Fly   745 ASSMPPTDGLILFAELQKSRRSFVLESELHAVYLVTPYSVCYQLQDIDWLLYVHMWEKLSSPMKK 809
            ..::......||:.:|:|.....||||.||.:||.|||.:..|... ||::|...:.:||...:.
Human   839 KGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQCNP-DWMIYFRQFSQLSPAEQN 902

  Fly   810 VGELVGVRDAFLYKALRGQT---KLDYKQMQIHKRFYIALALEELVNETPINVVVHKYKCHRGML 871
            |..::||.::|:.|...||.   |:|   ..:..|.|::..|..|:.||.|..|..|:...||.:
Human   903 VAAILGVSESFIGKKASGQAIGKKVD---KNVVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYI 964

  Fly   872 QSLQQMASTFAGIVTAFCNSLQ--WSTLALIVSQFKDRLFFGIHRDLIDLMRIPDLSQKRARALF 934
            |:|....::|:..|..||..|:  |...||:|...| :|.:.:..:||.||.:..:.:.||:.|:
Human   965 QNLLTGTASFSSCVLHFCEELEEFWVYRALLVELTK-KLTYCVKAELIPLMEVTGVLEGRAKQLY 1028

  Fly   935 DAGITSLVELAGADPVELEKVLYNSISFDSAKQHDHENADEAAKRNVVRNFYITGKAGMTVSEAA 999
            .||..||:.||.|:|    :||..:|...|.:|         ||:               :..:|
Human  1029 SAGYKSLMHLANANP----EVLVRTIDHLSRRQ---------AKQ---------------IVSSA 1065

  Fly  1000 KLLIGEARQFVQHEI 1014
            |:|:.|..:.:|.|:
Human  1066 KMLLHEKAEALQEEV 1080

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DNApol-thetaNP_524333.1 BRR2 209..978 CDD:224125 274/793 (35%)
DEAD 251..404 CDD:278688 73/155 (47%)
HELICc 542..616 CDD:197757 35/73 (48%)
PolA 1489..2055 CDD:223820
DNA_pol_A_theta 1668..2053 CDD:176475
HELQNP_598375.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..261 12/50 (24%)
PRK02362 318..1066 CDD:235032 274/804 (34%)
DEXHc_POLQ-like 319..521 CDD:350784 89/206 (43%)
DEAH box 463..466 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0749
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D103838at33208
OrthoFinder 1 1.000 - - FOG0001214
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101025
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.720

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