DRSC/TRiP Functional Genomics Resources

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Protein Alignment DNApol-theta and poln

DIOPT Version :9

Sequence 1:NP_524333.1 Gene:DNApol-theta / 41571 FlyBaseID:FBgn0002905 Length:2059 Species:Drosophila melanogaster
Sequence 2:XP_017946489.2 Gene:poln / 101732961 XenbaseID:XB-GENE-988834 Length:669 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DNApol-thetaNP_524333.1 BRR2 209..978 CDD:224125
DEAD 251..404 CDD:278688
HELICc 542..616 CDD:197757
PolA 1489..2055 CDD:223820
DNA_pol_A_theta 1668..2053 CDD:176475
polnXP_017946489.2 DNA_pol_P_Exo 16..220 CDD:407886
DNA_pol_A 251..653 CDD:395381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10133
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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