DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12279 and SEN1

DIOPT Version :10

Sequence 1:NP_650227.1 Gene:CG12279 / 41570 FlyBaseID:FBgn0038080 Length:110 Species:Drosophila melanogaster
Sequence 2:NP_195302.1 Gene:SEN1 / 829730 AraportID:AT4G35770 Length:182 Species:Arabidopsis thaliana


Alignment Length:101 Identity:25/101 - (24%)
Similarity:40/101 - (39%) Gaps:18/101 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 VRNESELKETGVLPASINIP----LSELEKALNLPEEDFAQTYGRVK-PAV-----------DAV 69
            ||...||.:.|.....:..|    :....:|:|:|.. :....|.|| |:.           |.:
plant    75 VRVARELAQAGYRYLDVRTPDEFSIGHPTRAINVPYM-YRVGSGMVKNPSFLRQVSSHFRKHDEI 138

  Fly    70 LIFSCKAGGRAARAANLASTLGFTNAKAYAGSWTEW 105
            :| .|::|..:..|:....|.|||.....||.:..|
plant   139 II-GCESGQMSFMASTDLLTAGFTAITDIAGGYVAW 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12279NP_650227.1 RHOD_HSP67B2 2..107 CDD:238777 25/101 (25%)
SEN1NP_195302.1 RHOD 64..182 CDD:444705 25/101 (25%)

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