DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12279 and AT2G42220

DIOPT Version :9

Sequence 1:NP_650227.1 Gene:CG12279 / 41570 FlyBaseID:FBgn0038080 Length:110 Species:Drosophila melanogaster
Sequence 2:NP_565969.1 Gene:AT2G42220 / 818822 AraportID:AT2G42220 Length:234 Species:Arabidopsis thaliana


Alignment Length:112 Identity:24/112 - (21%)
Similarity:47/112 - (41%) Gaps:23/112 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EEVKDIPNHPEKYLFDVRNESELKETGVLPASINIPL----------SELEKAL--NLPEEDFAQ 57
            ||.|.:.......:.|||::::.:...:...| :|||          :.:::.:  |.....|..
plant    55 EEAKQLIAEEGYSVVDVRDKTQFERAHIKSCS-HIPLFIYNEDNDIGTIIKRTVHNNFSGLFFGL 118

  Fly    58 TYGRVKP----------AVDAVLIFSCKAGGRAARAANLASTLGFTN 94
            .:.:|.|          :.|:.|:..|:.|.|:|.||:.....|:.|
plant   119 PFTKVNPEFLKSVRNEFSQDSKLLLVCQEGLRSAAAASRLEEAGYEN 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12279NP_650227.1 RHOD_HSP67B2 2..107 CDD:238777 24/112 (21%)
AT2G42220NP_565969.1 RHOD 56..177 CDD:238089 23/111 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1478958at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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