DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12279 and tstd1

DIOPT Version :10

Sequence 1:NP_650227.1 Gene:CG12279 / 41570 FlyBaseID:FBgn0038080 Length:110 Species:Drosophila melanogaster
Sequence 2:XP_021328471.1 Gene:tstd1 / 563265 ZFINID:ZDB-GENE-081107-63 Length:117 Species:Danio rerio


Alignment Length:108 Identity:40/108 - (37%)
Similarity:60/108 - (55%) Gaps:2/108 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TYEEVKDIPNHPEKYLFDVRNESELKETGVLPASINIPLSELEKALNLPEEDFAQTYGRVKPAVD 67
            :|.::|.|.......|.|||...|:.. |.:|.||:||:..:.:.|:|...:|...:|..||.:|
Zfish     9 SYSDLKSILAKGSAVLVDVRTNEEVAR-GTIPGSIHIPVGNIGQDLSLDAAEFQSKFGVGKPPLD 72

  Fly    68 AV-LIFSCKAGGRAARAANLASTLGFTNAKAYAGSWTEWQAKQ 109
            .. |:|.|:.|.|.|.|...|.:|||.||:.|||::.||..|:
Zfish    73 CTELVFFCQLGRRGAAATEKAKSLGFKNARNYAGAYKEWSEKE 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12279NP_650227.1 RHOD_HSP67B2 2..107 CDD:238777 39/104 (38%)
tstd1XP_021328471.1 RHOD 9..113 CDD:444705 39/104 (38%)

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