DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12279 and Tstd3

DIOPT Version :10

Sequence 1:NP_650227.1 Gene:CG12279 / 41570 FlyBaseID:FBgn0038080 Length:110 Species:Drosophila melanogaster
Sequence 2:NP_001094267.1 Gene:Tstd3 / 500420 RGDID:1563572 Length:157 Species:Rattus norvegicus


Alignment Length:114 Identity:49/114 - (42%)
Similarity:70/114 - (61%) Gaps:6/114 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TYEEVKDIPNHPEKYLFDVRNESELKETGVLPASINIPLSELEKALNLPEEDFAQTYGRVKPAVD 67
            ||.|:|::.|..:..|.||||..|:.|.|.:|.|:||||.|:.:||.:...:|.:.||..||:..
  Rat    44 TYRELKNLLNSKDIMLIDVRNTWEILEHGKIPGSVNIPLDEVGEALQMNPREFKEKYGEEKPSKS 108

  Fly    68 AVLIFSCKAGGRAARAANLASTLGFTNAKAYAGSWTEW------QAKQS 110
            ..|:|||.||.|:.:|.:.|.:|||.:|:.|.|.||||      :.|||
  Rat   109 DRLVFSCLAGVRSKKAMDTAISLGFNSAQHYIGGWTEWVTYEISEKKQS 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12279NP_650227.1 RHOD_HSP67B2 2..107 CDD:238777 46/109 (42%)
Tstd3NP_001094267.1 RHOD_HSP67B2 43..148 CDD:238777 46/103 (45%)

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