DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12279 and CG6000

DIOPT Version :9

Sequence 1:NP_650227.1 Gene:CG12279 / 41570 FlyBaseID:FBgn0038080 Length:110 Species:Drosophila melanogaster
Sequence 2:NP_001287495.1 Gene:CG6000 / 42851 FlyBaseID:FBgn0039145 Length:154 Species:Drosophila melanogaster


Alignment Length:106 Identity:51/106 - (48%)
Similarity:67/106 - (63%) Gaps:0/106 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YEEVKDIPNHPEKYLFDVRNESELKETGVLPASINIPLSELEKALNLPEEDFAQTYGRVKPAVDA 68
            |:.||.:|:.|:|.|.|||...||||||.:||||||||..:.:.|...|:.|...|||.||..:.
  Fly    45 YDVVKKLPSEPQKLLIDVREPEELKETGQIPASINIPLGVVSQELAASEQLFKSKYGREKPKPET 109

  Fly    69 VLIFSCKAGGRAARAANLASTLGFTNAKAYAGSWTEWQAKQ 109
            .:||.||.|.|:.:||..|:.|||.|.|.|.|||.:|..::
  Fly   110 EIIFHCKIGKRSLKAAEAAAALGFKNVKNYQGSWLDWAERE 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12279NP_650227.1 RHOD_HSP67B2 2..107 CDD:238777 51/102 (50%)
CG6000NP_001287495.1 RHOD_HSP67B2 43..148 CDD:238777 51/102 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461713
Domainoid 1 1.000 75 1.000 Domainoid score I9063
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 45 1.000 Inparanoid score I2670
Isobase 1 0.950 - 0 Normalized mean entropy S2912
OMA 1 1.010 - - QHG56156
OrthoDB 1 1.010 - - D124506at33392
OrthoFinder 1 1.000 - - FOG0001321
OrthoInspector 1 1.000 - - otm42406
orthoMCL 1 0.900 - - OOG6_100801
Panther 1 1.100 - - P PTHR44086
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1076
SonicParanoid 00.000 Not matched by this tool.
1211.890

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