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Protein Alignment Past1 and Ehd3

DIOPT Version :10

Sequence 1:	NP_731737.1	Gene:	Past1 / 41569	FlyBaseID:	FBgn0016693	Length:	540	Species:	Drosophila melanogaster
Sequence 2:	NP_620245.2	Gene:	Ehd3 / 192249	RGDID:	621762	Length:	535	Species:	Rattus norvegicus

Alignment Length:	526	Identity:	365/526 - (69%)
Similarity:	432/526 - (82%)	Gaps:	4/526 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly    13 REKNTQEVVENVIGELKKIYRSKLLPLEEHYQFHDFHSPKLEDPDFDAKPMILLVGQYSTGKTTF 77
            |.|...||.:.|...|||:|::|||||||:|:||:||||.|||.|||.|||:|||||||||||||
  Rat    10 RRKKDPEVFQTVSEGLKKLYKTKLLPLEEYYRFHEFHSPALEDADFDNKPMVLLVGQYSTGKTTF 74

  Fly    78 IRYLLERDFPGIRIGPEPTTDRFIAVMYDDKEGVIPGNALVVDPKKQFRPLSKYGNAFLNRFQCS 142
            ||||||:||||:|||||||||.|||||..|.||:||||||||||||.||.|:.:||||||||.|:
  Rat    75 IRYLLEQDFPGMRIGPEPTTDSFIAVMQGDVEGIIPGNALVVDPKKPFRKLNAFGNAFLNRFVCA 139

  Fly   143 SVASPVLNAISIVDTPGILSGEKQRIDRGYDFTGVLEWFAERVDRIILLFDAHKLDISDEFRRSI 207
            .:.:.||.:||::|||||||||||||.|||||..|||||||||||||||||||||||||||...|
  Rat   140 QLPNAVLESISVIDTPGILSGEKQRISRGYDFAAVLEWFAERVDRIILLFDAHKLDISDEFSEVI 204

  Fly   208 EALKGHDDKIRIILNKADMIDHQQLMRVYGALMWSLGKVLQTPEVARVYIGSFWDQPLRFDANRR 272
            :|||.|:||:|::|||||.|:.||||||||||||||||::.||||.||||||||..||....||:
  Rat   205 KALKNHEDKMRVVLNKADQIETQQLMRVYGALMWSLGKIVNTPEVIRVYIGSFWSHPLLIPDNRK 269

  Fly   273 LFEDEEQDLFRDLQSLPRNAALRKLNDLIKRARLAKVHAFIIAELRKDMPSVFGKDSKKKDLIKN 337
            |||.||||||:|:||||||||||||||||||||||||||:||:.|:|:||||||||:|||:|:.|
  Rat   270 LFEAEEQDLFKDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKEMPSVFGKDTKKKELVNN 334

  Fly   338 LGQVYDRIQREHSISPGDFPDIKKMQEVLQHQDFTKFHSLKPHLLDIVDNMLAKDIARLMEMIPQ 402
            |.::|.||:|||.|||||||::|:||:.||.|||:||..||..||::||:|||.|||:||.::.|
  Rat   335 LAEIYGRIEREHQISPGDFPNLKRMQDQLQAQDFSKFQPLKSKLLEVVDDMLAHDIAQLMVLVRQ 399

  Fly   403 EEMTMVADPIVKGGAFEGVIDDHVSPFGYMKGEGIDAGYGEHEWICNKDKPRTDGIFNGLGPVDG 467
            || |.....:||||||||.:.   .|||:..|||...|..:.||:..:|||..|.||..|.||||
  Rat   400 EE-TQRPVQMVKGGAFEGTLQ---GPFGHGYGEGAGEGIDDAEWVVARDKPMYDEIFYTLSPVDG 460

  Fly   468 KISGATAKQELIKSKLPNSVLSKIWKLSDVDGDGFLDSDEFALALHLINVKLEGCELPTVLPEHL 532
            ||:||.||:|:::||||||||.|||||:|:|.||.||.:|||||.|||.|||||.|||:.||.||
  Rat   461 KITGANAKKEMVRSKLPNSVLGKIWKLADIDKDGMLDDEEFALANHLIKVKLEGHELPSELPAHL 525

  Fly   533 VPPSKR 538
            :|||||
  Rat   526 LPPSKR 531

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.