DRSC/TRiP Functional Genomics Resources

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Protein Alignment NijC and Ninj2

DIOPT Version :10

Sequence 1:NP_001097762.1 Gene:NijC / 41568 FlyBaseID:FBgn0038079 Length:138 Species:Drosophila melanogaster
Sequence 2:NP_067606.1 Gene:Ninj2 / 59115 RGDID:620552 Length:144 Species:Rattus norvegicus


Alignment Length:121 Identity:49/121 - (40%)
Similarity:76/121 - (62%) Gaps:8/121 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 MDANRYATKKTIAQGMLDIALLTANASQLKYILQVGEQHQFYKLMLILISLSIVMQLLVGILFVV 80
            ::.|.|||||::|:.|||:||..:||.:||.:|:.|...|:|..:|.|||.|:::|:::|||.||
  Rat    24 INLNHYATKKSVAESMLDVALFMSNAMRLKSVLEQGPFSQYYTTLLTLISASLLLQVVIGILLVV 88

  Fly    81 IGSLNINRQQDQTAAVILNDVILVVVFIISVVNVIISGFG--------IEYSSQPL 128
            |..||:|..::|.....||:....:|||..|:|:.|:.||        ...||.|:
  Rat    89 IARLNLNEVENQWRLNQLNNAATTLVFITVVINIFITAFGAHKTGSVAARTSSNPI 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NijCNP_001097762.1 Ninjurin 18..119 CDD:461482 44/100 (44%)
Ninj2NP_067606.1 Ninjurin 26..127 CDD:461482 44/100 (44%)
Helix alpha1. /evidence=ECO:0000250|UniProtKB:Q9NZG7 27..39 7/11 (64%)
Helix alpha2. /evidence=ECO:0000250|UniProtKB:Q9NZG7 40..59 9/18 (50%)

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