DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp1 and ACTL6A

DIOPT Version :10

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_004292.1 Gene:ACTL6A / 86 HGNCID:24124 Length:429 Species:Homo sapiens


Alignment Length:420 Identity:139/420 - (33%)
Similarity:220/420 - (52%) Gaps:63/420 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VVIDNGSGVIKAGFAGEHIPKCRFPNYIG----RPKHVRVMAGALEGD--------IFVGPKA-- 62
            :|.|.||..::||:|||..||..||..||    |.....:|  .::||        .::...|  
Human    14 LVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLM--EIDGDKGKQGGPTYYIDTNALR 76

  Fly    63 --EEHRGLLSIRYPMEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAA 125
              .|:...:|   |:::|:|.||:..:.|..:.| |..:.:....||||::|||.|.|..|||..
Human    77 VPRENMEAIS---PLKNGMVEDWDSFQAILDHTY-KMHVKSEASLHPVLMSEAPWNTRAKREKLT 137

  Fly   126 EFFFEGINAPALFVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDV 190
            |..||..|.||.|:...|||:.:|.||.||::||||...|.|:|:::|:.:...|::..:||..:
Human   138 ELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFI 202

  Fly   191 TRYLKTLIR------------------REG--FNFRSTAEF-EIVRSIKEKVC------YLATNP 228
            |...:.|.:                  |||  .|::...:. ::.||....:|      :.|:..
Human   203 TMQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVL 267

  Fly   229 QKEETVETEKFA-------YKLPDGKIFEIGPARFRAPEVLFRPD----LLGEECEGIHDVLMYS 282
            |..::...|:.|       |:.|:|...:.|..|.:.||.||.|.    |.|....|:..|:..|
Human   268 QVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAERLKIPEGLFDPSNVKGLSGNTMLGVSHVVTTS 332

  Fly   283 IEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKDLKIRIAAPQ---ERLYSTWMGG 344
            :...|:|:|..||.:::::||:||.:.|.|||..||.:.:...:::::.|..   ||.:|:|:||
Human   333 VGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKTPPSMRLKLIANNTTVERRFSSWIGG 397

  Fly   345 SILASLDTFKKMWISKREYEEEGQKAVHRK 374
            ||||||.||::|||||:||||.|::.|.||
Human   398 SILASLGTFQQMWISKQEYEEGGKQCVERK 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 ASKHA_NBD_Arp1 9..375 CDD:466820 139/420 (33%)
ACTL6ANP_004292.1 ASKHA_NBD_Arp4_ACTL6-like 8..420 CDD:466846 135/411 (33%)

Return to query results.
Submit another query.