DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and ARP1

DIOPT Version :9

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_011997.1 Gene:ARP1 / 856530 SGDID:S000001171 Length:384 Species:Saccharomyces cerevisiae


Alignment Length:372 Identity:187/372 - (50%)
Similarity:258/372 - (69%) Gaps:16/372 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NQPVVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEHRGLLSIRY 73
            |||||||||||:|||||:||..||......:|..|:.:||...|:||.|:|..|::.||||.:||
Yeast    12 NQPVVIDNGSGIIKAGFSGEERPKALEYCLVGNTKYDKVMLEGLQGDTFIGNNAQKLRGLLKLRY 76

  Fly    74 PMEHGIVTDWNDMERIWSYIYSKE-QLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINAPAL 137
            |::||:|.||:.||.||||:.::. ||....| ||:|:||||:||.:|||:.|:..||..:..||
Yeast    77 PIKHGVVEDWDSMELIWSYVLNEVLQLQNIGE-HPLLITEAPMNPLKNREQMAQVLFETFDVSAL 140

  Fly   138 FVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLIRRE- 201
            :||..|||||||:||.||.|:|.|:|....||||:|||:|.|:||:||.|.|:|..|:..:|:. 
Yeast   141 YVSNPAVLSLYASGRTTGCVVDCGEGYCSTVPIYDGFALPASMMRMDIGGADITEQLQFQLRKSA 205

  Fly   202 GFNFRSTAEFEIVRSIKEKVCYLATNPQKEETVETEKF---------AYKLPDGKIFEIGPARFR 257
            |.:..|::|.||||::||||||||.|.:|||    ||:         .:|||||:..|:|..|:|
Yeast   206 GVSLFSSSEREIVRTMKEKVCYLAKNIKKEE----EKYLQGTQDLISTFKLPDGRCIEVGNDRYR 266

  Fly   258 APEVLFRPDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHS 322
            |||:||.|.::|...:|:.|:.|.||.|.|:||||.|..:|:||||:|..||||||:|.:|:..:
Yeast   267 APEILFSPQIIGLGYDGLSDMCMQSIWKVDLDLRKPLLSSIILSGGTTTLKGFGDRMLWDLEALT 331

  Fly   323 AKDLKIRIAAPQERLYSTWMGGSILASLDTFKKMWISKREYEEEGQK 369
            ....||:|.||.||.|:||:|||||..|.||:::|..|.::.|:..:
Yeast   332 KGTSKIKIIAPSERKYTTWIGGSILTGLSTFQRLWTKKSDWLEDSTR 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:302596 187/372 (50%)
ACTIN 9..376 CDD:214592 187/372 (50%)
ARP1NP_011997.1 ACTIN 12..384 CDD:214592 187/372 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55293
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11937
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.880

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