DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and ARP2

DIOPT Version :9

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_010255.1 Gene:ARP2 / 851532 SGDID:S000002187 Length:391 Species:Saccharomyces cerevisiae


Alignment Length:392 Identity:166/392 - (42%)
Similarity:241/392 - (61%) Gaps:28/392 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEPYDVVVNQPVVIDNGSGVIKAGFAGEHIPKCRFPNYIGRP---KHVRVMAGALEGDIFVGPKA 62
            |:|::     |:|:|.|:|.:|.|.|||:.|...||:.:|||   ...|........||.:|.:|
Yeast     1 MDPHN-----PIVLDQGTGFVKIGRAGENFPDYTFPSIVGRPILRAEERASVATPLKDIMIGDEA 60

  Fly    63 EEHRGLLSIRYPMEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEF 127
            .|.|..|.|.||||:||:.:|.|||.:|.|.:.::.....|.:..:||||.|:||.:||||..|.
Yeast    61 SEVRSYLQISYPMENGIIKNWTDMELLWDYAFFEQMKLPSTSNGKILLTEPPMNPLKNREKMCEV 125

  Fly   128 FFEGINAPALFVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTR 192
            .||..:...::|::||||:|||.|..:|||:||||||||.||:||...:.|...|:|:|||||||
Yeast   126 MFEKYDFGGVYVAIQAVLALYAQGLSSGVVVDSGDGVTHIVPVYESVVLSHLTRRLDVAGRDVTR 190

  Fly   193 YLKTLIRREGFNFRSTAEFEIVRSIKEKVCY------LATNPQKEETVETEKFAYKLPDGKIFEI 251
            :|..|:.|.|:.|..||:||.||.||||:||      |.|...:|.|...|  :|:||||:..::
Yeast   191 HLIDLLSRRGYAFNRTADFETVRQIKEKLCYVSYDLDLDTKLARETTALVE--SYELPDGRTIKV 253

  Fly   252 GPARFRAPEVLFRPDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLS 316
            |..||.|||.||:|.|:..|..|:.::|..:::.:|:|:|..||:.|||||||:::.|...||..
Yeast   254 GQERFEAPECLFQPGLVDVEQPGVGELLFNTVQSADVDIRSSLYKAIVLSGGSSMYPGLPSRLEK 318

  Fly   317 ELKK-------HS----AKDLKIRIAAPQERLYSTWMGGSILASLDTFK-KMWISKREYEEEGQK 369
            |||:       |:    ....|:||..|..|.:..::||::|||:...| .||:||:|::|.|..
Yeast   319 ELKQLWFSRVLHNDPSRLDKFKVRIEDPPRRKHMVFIGGAVLASIMADKDHMWLSKQEWQESGPS 383

  Fly   370 AV 371
            |:
Yeast   384 AM 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:302596 164/388 (42%)
ACTIN 9..376 CDD:214592 164/384 (43%)
ARP2NP_010255.1 ACTIN 4..387 CDD:214592 164/389 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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