DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and ACT1

DIOPT Version :10

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_116614.1 Gene:ACT1 / 850504 SGDID:S000001855 Length:375 Species:Saccharomyces cerevisiae


Alignment Length:370 Identity:200/370 - (54%)
Similarity:271/370 - (73%) Gaps:7/370 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEHRGLLSIRYPME 76
            :|||||||:.||||||:..|:..||:.:|||:|..:|.|..:.|.:||.:|:..||:|::|||:|
Yeast     8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTLRYPIE 72

  Fly    77 HGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINAPALFVSM 141
            |||||:|:|||:||.:.:..| |....|:|||||||||:||:.||||..:..||..|.||.:||:
Yeast    73 HGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPMNPKSNREKMTQIMFETFNVPAFYVSI 136

  Fly   142 QAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLIRREGFNFR 206
            |||||||::||.||:||||||||||.||||.||::||:|:|:|:||||:|.||..::...|::|.
Yeast   137 QAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRDLTDYLMKILSERGYSFS 201

  Fly   207 STAEFEIVRSIKEKVCYLATNPQKE-----ETVETEKFAYKLPDGKIFEIGPARFRAPEVLFRPD 266
            :|||.||||.||||:||:|.:.::|     ::...|| :|:||||::..||..||||||.||.|.
Yeast   202 TTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEK-SYELPDGQVITIGNERFRAPEALFHPS 265

  Fly   267 LLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKDLKIRIA 331
            :||.|..||......||.|.|:|:||.||.|||:|||:|:|.|..:|:..|:...:...:|::|.
Yeast   266 VLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMFPGIAERMQKEITALAPSSMKVKII 330

  Fly   332 APQERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRKTF 376
            ||.||.||.|:||||||||.||::|||||:||:|.|...||.|.|
Yeast   331 APPERKYSVWIGGSILASLTTFQQMWISKQEYDESGPSIVHHKCF 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 ASKHA_NBD_Arp1 9..375 CDD:466820 198/367 (54%)
ACT1NP_116614.1 ASKHA_NBD_actin 6..370 CDD:466823 196/363 (54%)

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