DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and ARP4A

DIOPT Version :10

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001323058.1 Gene:ARP4A / 843728 AraportID:AT1G73910 Length:167 Species:Arabidopsis thaliana


Alignment Length:109 Identity:32/109 - (29%)
Similarity:48/109 - (44%) Gaps:16/109 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VVIDNGSGVIKAGFAGEHIPKCRFPNYIGR--------PKHVRVMAGALEGD-------IFVGPK 61
            :|:|.||...|||:|||..||..||:.:|.        .........|.|.|       ::.|.:
plant    10 IVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEKGKRKLYTGSQ 74

  Fly    62 A-EEHRGLLSIRYPMEHGIVTDWNDMERIWSYIYSKEQLATFTE 104
            | ...|..:.|..|.:.||||||:.::.:|.:.:......|..|
plant    75 ALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRASSELTAAE 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 ASKHA_NBD_Arp1 9..375 CDD:466820 32/109 (29%)
ARP4ANP_001323058.1 ASKHA_ATPase-like 4..>109 CDD:483947 30/98 (31%)

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