DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and ACT8

DIOPT Version :10

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_175350.1 Gene:ACT8 / 841347 AraportID:AT1G49240 Length:377 Species:Arabidopsis thaliana


Alignment Length:373 Identity:201/373 - (53%)
Similarity:276/373 - (73%) Gaps:9/373 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QPVVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEHRGLLSIRYP 74
            ||:|.|||:|::||||||:..|:..||:.:|||:|..||.|..:.|.:||.:|:..||:|:::||
plant     8 QPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYP 72

  Fly    75 MEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINAPALFV 139
            :|||:|::|:|||:||.:.:..| |....|:||||||||||||:.||||..:..||..|:||::|
plant    73 IEHGVVSNWDDMEKIWHHTFYNE-LRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYV 136

  Fly   140 SMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLIRREGFN 204
            ::||||||||:||.||:||||||||:|.|||||||::||:|:|:|:||||:|.||..::...|:.
plant   137 AIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYM 201

  Fly   205 FRSTAEFEIVRSIKEKVCYLATNPQKEETVETEKFA------YKLPDGKIFEIGPARFRAPEVLF 263
            |.:|||.||||.||||:.::|.:.::|  :||.|.:      |:||||::..||..|||.|||||
plant   202 FTTTAEREIVRDIKEKLSFVAVDYEQE--METSKTSSSIEKNYELPDGQVITIGAERFRCPEVLF 264

  Fly   264 RPDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKDLKI 328
            :|..:|.|..|||:....||.|.|:|:||.||.|||||||:|:|.|..||:..|:...:...:||
plant   265 QPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKI 329

  Fly   329 RIAAPQERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRKTF 376
            ::.||.||.||.|:||||||||.||::|||||.||:|.|...||||.|
plant   330 KVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 ASKHA_NBD_Arp1 9..375 CDD:466820 199/370 (54%)
ACT8NP_175350.1 ASKHA_NBD_actin 8..372 CDD:466823 196/366 (54%)

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