DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and ACT4

DIOPT Version :10

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_200745.1 Gene:ACT4 / 836056 AraportID:AT5G59370 Length:377 Species:Arabidopsis thaliana


Alignment Length:372 Identity:202/372 - (54%)
Similarity:279/372 - (75%) Gaps:7/372 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QPVVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEHRGLLSIRYP 74
            ||:|.|||:|::||||||:..|:..||:.:|||:|..||.|..:.|.:||.:|:..||:|:::||
plant     8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYP 72

  Fly    75 MEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINAPALFV 139
            :|||||.:|:|||:||.:.:..| |....|:||||||||||||:.||||..:..||..|.||::|
plant    73 IEHGIVNNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYV 136

  Fly   140 SMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLIRREGFN 204
            ::||||||||:||.||:||||||||:|.||||||:|:||:|:|:|:||||:|.:|..::...|::
plant   137 AIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYS 201

  Fly   205 FRSTAEFEIVRSIKEKVCYLATNPQKE-ETVET----EKFAYKLPDGKIFEIGPARFRAPEVLFR 264
            |.:|||.||||.:|||:.|:|.:.::| ||.:|    || :::||||::..||..|||.|||||:
plant   202 FTTTAEREIVRDMKEKLSYIALDFEQELETSKTSSSVEK-SFELPDGQVITIGAERFRCPEVLFQ 265

  Fly   265 PDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKDLKIR 329
            |.::|.|..|||:....||.|.|:|:||.||.|||||||:|:|.|.|||:..|:...:...:||:
plant   266 PSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIK 330

  Fly   330 IAAPQERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRKTF 376
            :.||.||.||.|:||||||||.||::|||:|.||:|.|...||||.|
plant   331 VVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 ASKHA_NBD_Arp1 9..375 CDD:466820 200/369 (54%)
ACT4NP_200745.1 ASKHA_NBD_actin 8..372 CDD:466823 197/365 (54%)

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