DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and ARP7

DIOPT Version :9

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_567105.1 Gene:ARP7 / 825254 AraportID:AT3G60830 Length:363 Species:Arabidopsis thaliana


Alignment Length:388 Identity:110/388 - (28%)
Similarity:177/388 - (45%) Gaps:47/388 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QPVVIDNGSGVIKAGFA-GEHIPKCRFPNYIGRPKHVRVMAGALEGD----IFVGPKAEEHRGLL 69
            :.:|:|.||..:|||.| .:..|....|:.:.|    .|..|:...|    :|.....:      
plant     2 EALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR----MVDDGSSSADNPTTVFEDVTLD------ 56

  Fly    70 SIRYPMEHGIVTDWNDMERIWSYIYSKEQLATFT-------EDHPVLLTEAPLNPRRNREKAAEF 127
                |:|.|::.||:.||.:..|:       .:|       .:..:|.|:....|:..||:..:.
plant    57 ----PIERGLIRDWDAMEDLLRYV-------VYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQL 110

  Fly   128 FFEGINAPALFVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTR 192
            .||..|....:.|.||||||||.||::|..:|.|.|.....|:.||.....:..|.::.|.::|:
plant   111 MFETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTELTK 175

  Fly   193 YLKTLIRREGFNFRSTAEFEIVRSIKEKVCYLATNP---QKEETVETEKFAYKLPDGKIFEIGPA 254
            .....:.:.  |.........|..:||:....|.:.   :|.:..|.|:  :.||||::..||..
plant   176 LFAQELGKT--NPSMNLSMSDVEKLKEQYANCAEDEIAYKKTQNCEIEQ--HTLPDGQVISIGRE 236

  Fly   255 RFRAPEVLFRPDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELK 319
            |:...|.||:|.:||.|..||.:.|:..|.....:..:.|.:|.||.||:|...||..|...|..
plant   237 RYSVGEALFQPSILGLEEHGIVEQLVRIISTVSSENHRQLLENTVLCGGTTSMTGFESRFQKEAN 301

  Fly   320 KHSAKDLKIRIAAPQE------RLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRKTF 376
            ..|:. ::..:..|.|      .:||.|:||:|||.:...:...::|.:|:|.|...||||.|
plant   302 LCSSA-IRPTLVKPPEYMPENLGMYSAWVGGAILAKVVFPQNQHVTKADYDETGPSVVHRKCF 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:302596 109/386 (28%)
ACTIN 9..376 CDD:214592 109/386 (28%)
ARP7NP_567105.1 ACTIN 3..363 CDD:214592 109/385 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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