DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp1 and ACT3

DIOPT Version :9

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001326881.1 Gene:ACT3 / 824542 AraportID:AT3G53750 Length:377 Species:Arabidopsis thaliana


Alignment Length:371 Identity:201/371 - (54%)
Similarity:276/371 - (74%) Gaps:5/371 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QPVVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEHRGLLSIRYP 74
            ||:|.|||:|::||||||:..|:..||:.:|||:|..||.|..:.|.:||.:|:..||:|:::||
plant     8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYP 72

  Fly    75 MEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINAPALFV 139
            :|||||.:|:|||:||.:.:..| |....|:||:|||||||||:.||||..:..||..||||::|
plant    73 IEHGIVNNWDDMEKIWHHTFYNE-LRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYV 136

  Fly   140 SMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLIRREGFN 204
            ::||||||||:||.||:||||||||:|.||||||:|:||:|:|:|:||||:|..|..::...|::
plant   137 AIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYS 201

  Fly   205 FRSTAEFEIVRSIKEKVCYLATNPQKE-ETVETEKFA---YKLPDGKIFEIGPARFRAPEVLFRP 265
            |.:|||.||||.||||:||:|.:.::| ||.:|....   |:||||::..||..|||.||||::|
plant   202 FTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQP 266

  Fly   266 DLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKDLKIRI 330
            .::|.|..|||:....||.|.|:|:||.||.|||||||:|:|.|..||:..|:...:...:||::
plant   267 SMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKV 331

  Fly   331 AAPQERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRKTF 376
            .||.||.||.|:||||||||.||::|||:|.||:|.|...||||.|
plant   332 VAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:302596 200/369 (54%)
ACTIN 9..376 CDD:214592 200/369 (54%)
ACT3NP_001326881.1 NBD_sugar-kinase_HSP70_actin 5..377 CDD:418402 200/369 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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