DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and ARP6

DIOPT Version :10

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_566861.1 Gene:ARP6 / 823150 AraportID:AT3G33520 Length:421 Species:Arabidopsis thaliana


Alignment Length:429 Identity:125/429 - (29%)
Similarity:195/429 - (45%) Gaps:77/429 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPK----AEEHRGLLS-- 70
            ||:|||.|:||||..||..|....||.:.:|         |....|:.|.    ..:...|.|  
plant     5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP---------LSSKKFIHPSPLTTLSDEIDLTSAA 60

  Fly    71 IRYPMEHGIVTDWNDMER-IWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINA 134
            :|.|::.|.:.: :|::| |||:::: ..|........:|||||||:....:....|..||....
plant    61 VRRPIDRGYLIN-SDLQREIWSHLFT-SLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDFGF 123

  Fly   135 PALFVS-MQAVLSLYATGR---------VTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRD 189
            .:|::: .|:::.||...|         ...:|:|.|...|||||:...|.:.|:|.|:|:.|:.
plant   124 SSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKA 188

  Fly   190 VTRYLKTLIRREGFNFRSTAEFEIVRSIKEKVCYLATNPQKEETVETE-----KFAYKLPDG--- 246
            .|.|||.|:.....|...  |..:|...|||:|:::.:..::..:...     |..|.||||   
plant   189 FTNYLKELVSYRSINVMD--ETFLVDDAKEKLCFVSLDLLRDLRLARNGNTLIKSTYVLPDGVTH 251

  Fly   247 ---------------------------KIFEIGPA------------RFRAPEVLFRPDLLGEEC 272
                                       |:.|...|            ||..||.||:|..||...
plant   252 TKGYVKDPQAAKRFLSLSEKESVVVMDKVGERKKADMNKNEIDLTNERFLVPETLFQPADLGMNQ 316

  Fly   273 EGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKDLKIRIAAPQERL 337
            .|:.:.::.:|......|:.:|||:|:|:||||||....:||..||:........::|...::.:
plant   317 AGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPI 381

  Fly   338 YSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRKTF 376
            ...|.|||:|||...|:.|.::|.||||.|.....|:.|
plant   382 LGVWRGGSLLASSPDFESMCVTKAEYEELGSARCRRRFF 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 ASKHA_NBD_Arp1 9..375 CDD:466820 124/426 (29%)
ARP6NP_566861.1 ASKHA_NBD_Arp6 4..411 CDD:466816 122/418 (29%)

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