DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and ARP2

DIOPT Version :9

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_189336.1 Gene:ARP2 / 822317 AraportID:AT3G27000 Length:389 Species:Arabidopsis thaliana


Alignment Length:381 Identity:160/381 - (41%)
Similarity:235/381 - (61%) Gaps:21/381 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALE---GDIFVGPKAEEHRGLLSIRY 73
            ||.|||:|.:|.|||||:.|...||..:|||. :|.....:|   .||.||....|.|..|.|.|
plant     7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPL-LRYEESLMEQQVKDIVVGETCSELRHQLDINY 70

  Fly    74 PMEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINAPALF 138
            |:.:|||.:|:|||.:|.:.:..| |.....|..:|||:.||||.:||||..|..||..|...:|
plant    71 PVHNGIVQNWDDMEHVWDHAFYNE-LKINPSDCKILLTDPPLNPSKNREKMIETMFEKYNFAGVF 134

  Fly   139 VSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLIRREGF 203
            :.:||||:|||.|.:||:|:||||||||.||:.:|::.||...|:::|||.:|.||..|:.|.|:
plant   135 IQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRGY 199

  Fly   204 NFRSTAEFEIVRSIKEKVCYLATNPQKEETVETEKFA----YKLPDGKIFEIGPARFRAPEVLFR 264
            ....||:||.||.||||:||::.:.::|..:..|...    |.||||::.::|..||:|||.||.
plant   200 AMNKTADFETVREIKEKLCYISYDYKRESQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFT 264

  Fly   265 PDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELK---------- 319
            |:|:..|.:|:.|::...|::.|:|.|.||||:||||||||::.|...||..|::          
plant   265 PELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKG 329

  Fly   320 -KHSAKDLKIRIAAPQERLYSTWMGGSILAS-LDTFKKMWISKREYEEEGQKAVHR 373
             |...|.|::||..|..|.:..::||::||. :....:.||::.:|.|||...:::
plant   330 NKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWINREDYMEEGINCLNK 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:302596 160/381 (42%)
ACTIN 9..376 CDD:214592 160/381 (42%)
ARP2NP_189336.1 ACTIN 4..387 CDD:214592 160/381 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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