DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp1 and ACT2

DIOPT Version :9

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001327851.1 Gene:ACT2 / 821411 AraportID:AT3G18780 Length:377 Species:Arabidopsis thaliana


Alignment Length:373 Identity:201/373 - (53%)
Similarity:276/373 - (73%) Gaps:9/373 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QPVVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEHRGLLSIRYP 74
            ||:|.|||:|::||||||:..|:..||:.:|||:|..||.|..:.|.:||.:|:..||:|:::||
plant     8 QPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYP 72

  Fly    75 MEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINAPALFV 139
            :|||:|::|:|||:||.:.:..| |....|:||||||||||||:.||||..:..||..|:||::|
plant    73 IEHGVVSNWDDMEKIWHHTFYNE-LRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYV 136

  Fly   140 SMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLIRREGFN 204
            ::||||||||:||.||:||||||||:|.|||||||::||:|:|:|:||||:|.||..::...|:.
plant   137 AIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYM 201

  Fly   205 FRSTAEFEIVRSIKEKVCYLATNPQKEETVETEKFA------YKLPDGKIFEIGPARFRAPEVLF 263
            |.:|||.||||.||||:.::|.:.::|  :||.|.:      |:||||::..||..|||.|||||
plant   202 FTTTAEREIVRDIKEKLSFVAVDYEQE--METSKTSSSIEKNYELPDGQVITIGAERFRCPEVLF 264

  Fly   264 RPDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKDLKI 328
            :|..:|.|..|||:....||.|.|:|:||.||.|||||||:|:|.|..||:..|:...:...:||
plant   265 QPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKI 329

  Fly   329 RIAAPQERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRKTF 376
            ::.||.||.||.|:||||||||.||::|||||.||:|.|...||||.|
plant   330 KVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:302596 200/371 (54%)
ACTIN 9..376 CDD:214592 200/371 (54%)
ACT2NP_001327851.1 NBD_sugar-kinase_HSP70_actin 3..377 CDD:418402 200/371 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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