DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and ACT11

DIOPT Version :9

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_187818.1 Gene:ACT11 / 820385 AraportID:AT3G12110 Length:377 Species:Arabidopsis thaliana


Alignment Length:372 Identity:203/372 - (54%)
Similarity:278/372 - (74%) Gaps:7/372 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QPVVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEHRGLLSIRYP 74
            ||:|.|||:|::||||||:..|:..||:.:|||:|..||.|..:.|.:||.:|:..||:|:::||
plant     8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYP 72

  Fly    75 MEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINAPALFV 139
            :|||||::|:|||:||.:.:..| |....|:||||||||||||:.||||..:..||..|.||::|
plant    73 IEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYV 136

  Fly   140 SMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLIRREGFN 204
            ::||||||||:||.||:||||||||:|.||||||:|:||:|:|:|:||||:|.||..::...|::
plant   137 AIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 201

  Fly   205 FRSTAEFEIVRSIKEKVCYLATNPQKE-ETVET----EKFAYKLPDGKIFEIGPARFRAPEVLFR 264
            |.::||.||||.:|||:.|:|.:.::| ||..|    || :|:||||::..||..|||.|||||:
plant   202 FTTSAEREIVRDVKEKLAYIALDYEQEMETANTSSSVEK-SYELPDGQVITIGGERFRCPEVLFQ 265

  Fly   265 PDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKDLKIR 329
            |.|:|.|..|||:....||.|.|:|:||.||.|||||||:|:|.|..||:..|:...:...:||:
plant   266 PSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIK 330

  Fly   330 IAAPQERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRKTF 376
            :.||.||.||.|:||||||||.||::|||:|.||:|.|...||||.|
plant   331 VVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:302596 202/370 (55%)
ACTIN 9..376 CDD:214592 202/370 (55%)
ACT11NP_187818.1 NBD_sugar-kinase_HSP70_actin 5..377 CDD:418402 202/370 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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