DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and Actr3

DIOPT Version :10

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_112330.1 Gene:Actr3 / 81732 RGDID:71024 Length:418 Species:Rattus norvegicus


Alignment Length:406 Identity:136/406 - (33%)
Similarity:207/406 - (50%) Gaps:61/406 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VIDNGSGVIKAGFAGEHIPKCRFPNYI--------GRPKHVRVMAGALEGDIFVGPKAEEHRGLL 69
            |:|.|:|..|.|:||...|:...|:.|        |.....|||.|..:.|.|:|.:|.| :...
  Rat     9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIE-KPTY 72

  Fly    70 SIRYPMEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINA 134
            :.::|:.||||.||:.|||....:..| .|....|||..||||.|||...|||..||..||..|.
  Rat    73 ATKWPIRHGIVEDWDLMERFMEQVIFK-YLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNV 136

  Fly   135 PALFVSMQAVLSLYA--TGR------VTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVT 191
            |.|::::||||:|.|  |.|      :||.|:||||||||.:|:.||:.:...|..:.|||||:|
  Rat   137 PGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 201

  Fly   192 RYLKTLIRREGFNFRSTAEFEIVRSIKEKVCYLATNPQKE------------------ETVETEK 238
            .:::.|:|............|..:::||:..|:..:..||                  ..:..::
  Rat   202 YFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGVNAISKKE 266

  Fly   239 FAYKLPDGKIFEIGPARFRAPEVLFRPDLLGEE-CEGIHDVLMYSIEKSDMDLRKMLYQNIVLSG 302
            |:        .::|..||..||:.|.|:....: .:.|.:|:...|:...:|:|:.||:||||||
  Rat   267 FS--------IDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSG 323

  Fly   303 GSTLFKGFGDRLLSELKKH----------------SAKDLKIRIAAPQERLYSTWMGGSILASLD 351
            |||:|:.||.||..:||:.                ..|.:.:::.....:.|:.|.|||:|||..
  Rat   324 GSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTP 388

  Fly   352 TFKKMWISKREYEEEG 367
            .|.::..:|::|||.|
  Rat   389 EFYQVCHTKKDYEEIG 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 ASKHA_NBD_Arp1 9..375 CDD:466820 136/406 (33%)
Actr3NP_112330.1 ASKHA_NBD_Arp3-like 7..410 CDD:466822 136/406 (33%)

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