DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and ACTL8

DIOPT Version :10

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_110439.2 Gene:ACTL8 / 81569 HGNCID:24018 Length:366 Species:Homo sapiens


Alignment Length:378 Identity:117/378 - (30%)
Similarity:193/378 - (51%) Gaps:45/378 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VVIDNGSGVIKAGFAGEHIPKCRFPNYIG------RPKHVRVMAGALEGDIFVGPKAEEHRGLLS 70
            |:||:|||.:|||.||.:.|:..|||.:.      .|                ||.....|..|.
Human     6 VIIDHGSGFLKAGTAGWNEPQMVFPNIVNYLPCKENP----------------GPSYARRRVSLG 54

  Fly    71 I--------RYPMEHGIVTDWNDMERIWSYI---YSKEQLATFTEDHPVLLTEAPLNPRRNREKA 124
            |        .||:|.|.:.:|..::.:||::   :.:||     |..||::||.||....:|:|.
Human    55 IDICHPDTFSYPIERGRILNWEGVQYLWSFVLENHRREQ-----EVPPVIITETPLREPADRKKM 114

  Fly   125 AEFFFEGINAPALFVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRD 189
            .|..||.::.|::.::.|..:||||:|.:||||:|||.|:|...|.::|..:|.|...::.||:|
Human   115 LEILFELLHVPSVLLADQLQMSLYASGLLTGVVVDSGYGLTRVQPFHQGRPLPASGKTLEFAGQD 179

  Fly   190 VTRYLKTLIRREGFNFRSTAEFEIVRSIKEKVCYLATN-------PQKEETVETEKFAYKLPDGK 247
            ::.||...:.:|..:.|...:.|.|...:...||:..|       .:::::...|...|:||||.
Human   180 LSAYLLKSLFKEDCDRRCLFQLETVAVTQMNKCYVPQNLGEALDFRERQQSALDESNTYQLPDGS 244

  Fly   248 IFEIGPARFRAPEVLFRPDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGD 312
            ..|:.|.:..|||:.|.|.:..:....|...::.|:|..::.||.:|..:::..||:||:.||..
Human   245 RVELTPMQRVAPEMFFSPQVFEQPGPSIPRAIVESVESCEISLRPLLVSHVMACGGNTLYPGFTK 309

  Fly   313 RLLSELKKHSAKDLKIRIAAPQERLYSTWMGGSILASLDTFKKMWISKREYEE 365
            ||..||........|..:.....|.:|.|:|.|::|.|.|::..|:|:.||.|
Human   310 RLFRELMGDHVSSTKATVWEGSNRNFSVWLGASVVAHLSTYQSEWMSREEYGE 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 ASKHA_NBD_Arp1 9..375 CDD:466820 117/378 (31%)
ACTL8NP_110439.2 ACTIN 4..363 CDD:214592 117/378 (31%)

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