DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and POTEJ

DIOPT Version :10

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_016860230.1 Gene:POTEJ / 653781 HGNCID:37094 Length:1048 Species:Homo sapiens


Alignment Length:370 Identity:190/370 - (51%)
Similarity:264/370 - (71%) Gaps:7/370 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEHRGLLSIRYPME 76
            :|||||||:.||||||:..|:..||:.:|.|:...:|.|..:.:.:||.:|:..||:|:::||||
Human   681 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGCPRQQGMMGGMHQKESYVGKEAQSKRGILTLKYPME 745

  Fly    77 HGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINAPALFVSM 141
            |||:|:|:|||:||.:.:..| |....|:||:|||||||||:.||||..:..||..|.||::|::
Human   746 HGIITNWDDMEKIWHHTFYNE-LRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 809

  Fly   142 QAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLIRREGFNFR 206
            ||:||||.:||.||:|:||||||||.||||:|.|:||:.:|:|:|||::|.||..::...|:.|.
Human   810 QAMLSLYTSGRTTGIVMDSGDGVTHTVPIYDGNALPHATLRLDLAGRELTDYLMKILTERGYRFT 874

  Fly   207 STAEFEIVRSIKEKVCYLATNPQKE-----ETVETEKFAYKLPDGKIFEIGPARFRAPEVLFRPD 266
            :.||.||||.||||:||:|.:.::|     .:...|| :|:||||::..|....||.||.||:|.
Human   875 TMAEREIVRDIKEKLCYVALDFEQEMAMVASSSSLEK-SYELPDGQVITISNEWFRCPEALFQPC 938

  Fly   267 LLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKDLKIRIA 331
            .||.|..|||:....||.|||:|:||.||.|.|||||:|::.|...|:..|:...:...:||||.
Human   939 FLGMESCGIHETTFNSIMKSDVDIRKDLYTNTVLSGGTTMYPGMAHRMQKEIAALAPSMMKIRII 1003

  Fly   332 APQERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRKTF 376
            ||.:|.||.|:||||||||.||::|||||:||:|.|...||||.|
Human  1004 APPKRKYSVWVGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 1048

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 ASKHA_NBD_Arp1 9..375 CDD:466820 188/367 (51%)
POTEJXP_016860230.1 ANKYR 102..359 CDD:440430
ANK repeat 137..166 CDD:293786
ANK repeat 168..209 CDD:293786
ANK repeat 211..242 CDD:293786
ANK repeat 244..275 CDD:293786
ANK repeat 277..308 CDD:293786
2A1904 <343..580 CDD:273344
CCDC144C 621..>674 CDD:464371
ASKHA_NBD_actin 679..1043 CDD:466823 185/363 (51%)
Blue background indicates that the domain is not in the aligned region.

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