DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and Actr8

DIOPT Version :9

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_006519372.2 Gene:Actr8 / 56249 MGIID:1860775 Length:686 Species:Mus musculus


Alignment Length:300 Identity:65/300 - (21%)
Similarity:120/300 - (40%) Gaps:84/300 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QPVVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGP------KAEEHRGL 68
            :|.::|:.||             .::.|...:|::   :.|  |..::|.|      .....||.
Mouse   144 RPAILDHCSG-------------NKWTNTSQQPEY---LVG--EEALYVNPLDCYNIHWPIRRGQ 190

  Fly    69 LSIRYPMEHGIVTD-WNDMERIWSY------------------------IYSKEQLATFTEDHPV 108
            |:| :|...|.:|. ..|:|.|||:                        ||:|:.:....  |.:
Mouse   191 LNI-HPGPGGSLTAVLADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELV--HMI 252

  Fly   109 LLTEAPLNPRRNREKAAEFFFEGINAPALFVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEG 173
            |:               :..|.||     .|..::|.:.:.:|..:..|:|.||..|....:.:|
Mouse   253 LM---------------KMGFAGI-----VVHQESVCATFGSGLSSTCVVDVGDQKTSVCCVEDG 297

  Fly   174 FAMPHSIMRVDIAGRDVTRYLKTLIRREGFNFRS---TAEFE--IVRSIKEKVCYLATNPQKEET 233
            .:..::.:.:...|.||:|....|::|.||.:|.   |.:.:  :::.:||..|:|   .|....
Mouse   298 VSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLTNKMDCLLLQHLKETFCHL---DQDISG 359

  Fly   234 VETEKFAYKLPDGKI----FEIGPARFRAPEVLFRPDLLG 269
            ::..:|..:.||...    |.:|..:.:||..||.|...|
Mouse   360 LQDHEFQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFG 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:302596 64/299 (21%)
ACTIN 9..376 CDD:214592 64/299 (21%)
Actr8XP_006519372.2 NBD_sugar-kinase_HSP70_actin 160..>400 CDD:388382 59/270 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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