DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and actr2b

DIOPT Version :9

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_021336257.1 Gene:actr2b / 554861 ZFINID:ZDB-GENE-050410-4 Length:399 Species:Danio rerio


Alignment Length:389 Identity:163/389 - (41%)
Similarity:243/389 - (62%) Gaps:31/389 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMA--GALE------GDIFVGPKAEEHRGL 68
            ||.|||:|.:|.|:||.:.|:..||..:||| .:|..|  |.:|      .|:.||.:|.|.|.:
Zfish     9 VVCDNGTGFVKCGYAGSNFPEHIFPALVGRP-IIRSTAKVGNIEIKNNKKMDLMVGDEASELRSM 72

  Fly    69 LSIRYPMEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGIN 133
            |.:.||||:|||.:|:||:.:|.|.:..|:|...:.|..:||||.|:||.:||||..|..||...
Zfish    73 LEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNINSRDCKILLTEPPMNPTKNREKIIEVMFETYQ 137

  Fly   134 APALFVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLI 198
            ...:::::||||:|||.|.:||||:||||||||..|:||||::||...|:||||||:||||..|:
Zfish   138 FTGVYIAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLL 202

  Fly   199 RREGFNFRSTAEFEIVRSIKEKVCYLATNPQKEETVETEKF----AYKLPDGKIFEIGPARFRAP 259
            ...|:.|..:|:||.||.:||.:||:..|.::|:.:..|..    :|.||||::.::|..||.||
Zfish   203 LLRGYAFNHSADFETVRMMKENLCYVGYNIEQEQKLALETTVLVESYTLPDGRVIKVGGERFEAP 267

  Fly   260 EVLFRPDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKK---- 320
            |.||:|.|:..|..|:.::|..:|:.:|:|.|...|::||||||||::.|...||..|||:    
Zfish   268 EALFQPHLINVEGVGVAELLFNTIQAADIDTRAEFYKHIVLSGGSTMYPGLPSRLERELKQLYLE 332

  Fly   321 -------HSAKDLKIRIAAPQERLYSTWMGGSILASL----DTFKKMWISKREYEEEGQKAVHR 373
                   ......||||..|..|.:..::||::||.:    |.|   |:::.||:|:|.:.:.:
Zfish   333 RVLKGDVDKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNF---WLTREEYQEKGVRVLEK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:302596 163/389 (42%)
ACTIN 9..376 CDD:214592 163/389 (42%)
actr2bXP_021336257.1 ACTIN 6..393 CDD:214592 163/387 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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