DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and Actr1a

DIOPT Version :9

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_058556.1 Gene:Actr1a / 54130 MGIID:1858964 Length:376 Species:Mus musculus


Alignment Length:376 Identity:298/376 - (79%)
Similarity:346/376 - (92%) Gaps:0/376 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEPYDVVVNQPVVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEH 65
            ||.|||:.|||||||||||||||||||:.|||..||||:||||||||||||||||||:|||||||
Mouse     1 MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEH 65

  Fly    66 RGLLSIRYPMEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFE 130
            |||||||||||||||.|||||||||.|:|||:||.||:|:|||||||||||||:|||:|||.|||
Mouse    66 RGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFE 130

  Fly   131 GINAPALFVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLK 195
            ..|.||||:|||||||||||||.|||||||||||||||||||||||||||||:|||||||:|:|:
Mouse   131 TFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVSRFLR 195

  Fly   196 TLIRREGFNFRSTAEFEIVRSIKEKVCYLATNPQKEETVETEKFAYKLPDGKIFEIGPARFRAPE 260
            ..:|:||::|.|::|||||::|||:.|||:.||||:||:||||..|.||||...||||:||||||
Mouse   196 LYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQYYLPDGSTIEIGPSRFRAPE 260

  Fly   261 VLFRPDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKD 325
            :||||||:|||.||||:||:::|:|||||||:.|:.|||||||||||||||||||||:||.:.||
Mouse   261 LLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKD 325

  Fly   326 LKIRIAAPQERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRKTF 376
            :||||:||||||||||:|||||||||||||||:||:||||:|.:::|||||
Mouse   326 VKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRKTF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:302596 293/370 (79%)
ACTIN 9..376 CDD:214592 291/366 (80%)
Actr1aNP_058556.1 NBD_sugar-kinase_HSP70_actin 5..376 CDD:418402 293/370 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849219
Domainoid 1 1.000 619 1.000 Domainoid score I182
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H21173
Inparanoid 1 1.050 634 1.000 Inparanoid score I837
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55293
OrthoDB 1 1.010 - - D306902at33208
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 1 1.000 - - otm43901
orthoMCL 1 0.900 - - OOG6_103845
Panther 1 1.100 - - LDO PTHR11937
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4323
SonicParanoid 1 1.000 - - X3841
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

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