DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and zgc:101810

DIOPT Version :10

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001007773.1 Gene:zgc:101810 / 493612 ZFINID:ZDB-GENE-041121-7 Length:394 Species:Danio rerio


Alignment Length:381 Identity:166/381 - (43%)
Similarity:242/381 - (63%) Gaps:20/381 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVR--VMAGALE-GDIFVGPKAEEHRGLLSIRY 73
            :|.|||:|.:|.||||.:.|...||..:||| .:|  ...|::| .|:.||.:|.|.|.:|.:.|
Zfish     9 IVCDNGTGFVKCGFAGSNFPDHIFPALVGRP-IIRSDTKVGSIEIKDLMVGDEASECRSMLEVTY 72

  Fly    74 PMEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINAPALF 138
            |||:|:|..|.||..:|.:.:..::|.....|..|||||.|:||.:||:|.||..||......::
Zfish    73 PMENGMVRSWEDMIHLWDHTFGPQRLNISPPDCKVLLTEPPMNPMKNRQKIAEVMFETYRFHGIY 137

  Fly   139 VSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLIRREGF 203
            |::||||:|||.|.:||||:||||||||..|:||||::||...|:||||||:||||..|:...|:
Zfish   138 VAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGY 202

  Fly   204 NFRSTAEFEIVRSIKEKVCYLATNPQKEETVETEKF----AYKLPDGKIFEIGPARFRAPEVLFR 264
            .|..||:||.||.:|||:|::..|.::|:.:..|..    :|.||||::..:|..||.|||.||:
Zfish   203 AFNHTADFETVRMMKEKLCFVGYNIEQEQQLANETTVLVESYMLPDGRMIRVGGERFGAPEALFQ 267

  Fly   265 PDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKK--------- 320
            |.|:..|..|:.::|..:|:.:|:|||..||::||||||||::.|...||..|:|:         
Zfish   268 PHLVNVEGVGVAELLFNTIQAADIDLRADLYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKG 332

  Fly   321 --HSAKDLKIRIAAPQERLYSTWMGGSILASLDTFKK-MWISKREYEEEGQKAVHR 373
              ......||||..|..|.:..:|||::||::...|: .|:|:.||||:|.|.:.:
Zfish   333 DTEKLSKFKIRIEDPPRRKHMVFMGGAVLANIMKDKESFWLSRAEYEEKGLKLLDK 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 ASKHA_NBD_Arp1 9..375 CDD:466820 166/381 (44%)
zgc:101810NP_001007773.1 ASKHA_NBD_Arp2 7..388 CDD:466821 166/379 (44%)

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