DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and zgc:101810

DIOPT Version :9

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001007773.1 Gene:zgc:101810 / 493612 ZFINID:ZDB-GENE-041121-7 Length:394 Species:Danio rerio


Alignment Length:381 Identity:166/381 - (43%)
Similarity:242/381 - (63%) Gaps:20/381 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVR--VMAGALE-GDIFVGPKAEEHRGLLSIRY 73
            :|.|||:|.:|.||||.:.|...||..:||| .:|  ...|::| .|:.||.:|.|.|.:|.:.|
Zfish     9 IVCDNGTGFVKCGFAGSNFPDHIFPALVGRP-IIRSDTKVGSIEIKDLMVGDEASECRSMLEVTY 72

  Fly    74 PMEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINAPALF 138
            |||:|:|..|.||..:|.:.:..::|.....|..|||||.|:||.:||:|.||..||......::
Zfish    73 PMENGMVRSWEDMIHLWDHTFGPQRLNISPPDCKVLLTEPPMNPMKNRQKIAEVMFETYRFHGIY 137

  Fly   139 VSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLIRREGF 203
            |::||||:|||.|.:||||:||||||||..|:||||::||...|:||||||:||||..|:...|:
Zfish   138 VAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGY 202

  Fly   204 NFRSTAEFEIVRSIKEKVCYLATNPQKEETVETEKF----AYKLPDGKIFEIGPARFRAPEVLFR 264
            .|..||:||.||.:|||:|::..|.::|:.:..|..    :|.||||::..:|..||.|||.||:
Zfish   203 AFNHTADFETVRMMKEKLCFVGYNIEQEQQLANETTVLVESYMLPDGRMIRVGGERFGAPEALFQ 267

  Fly   265 PDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKK--------- 320
            |.|:..|..|:.::|..:|:.:|:|||..||::||||||||::.|...||..|:|:         
Zfish   268 PHLVNVEGVGVAELLFNTIQAADIDLRADLYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKG 332

  Fly   321 --HSAKDLKIRIAAPQERLYSTWMGGSILASLDTFKK-MWISKREYEEEGQKAVHR 373
              ......||||..|..|.:..:|||::||::...|: .|:|:.||||:|.|.:.:
Zfish   333 DTEKLSKFKIRIEDPPRRKHMVFMGGAVLANIMKDKESFWLSRAEYEEKGLKLLDK 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:302596 166/381 (44%)
ACTIN 9..376 CDD:214592 166/381 (44%)
zgc:101810NP_001007773.1 ACTIN 6..382 CDD:214592 164/373 (44%)
NBD_sugar-kinase_HSP70_actin 6..382 CDD:302596 164/373 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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