DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and actrt2

DIOPT Version :10

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001006111.1 Gene:actrt2 / 448563 XenbaseID:XB-GENE-22041684 Length:375 Species:Xenopus tropicalis


Alignment Length:374 Identity:172/374 - (45%)
Similarity:244/374 - (65%) Gaps:10/374 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VVNQPVVI-DNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEHRGLLS 70
            :|::|.|| |.|||..|||.:||.:|....|:.:|.......|.||.:...:||..|...|.:|.
 Frog     6 LVHKPAVIFDIGSGNCKAGMSGEDLPTAVVPSVVGHLSDRSAMLGAGQQPYYVGEMAMSKRAILD 70

  Fly    71 IRYPMEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINAP 135
            :.:|::.|||..|::|.:||.|:| |.:|...:.:|||.||||||||.|||.|.||.|||..|.|
 Frog    71 LVFPIKEGIVKSWDNMIKIWKYLY-KYELKKPSSEHPVFLTEAPLNPLRNRHKMAEIFFENFNVP 134

  Fly   136 ALFVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLIRR 200
            |::||.||.|:|||:|..||:|||.|.|:||.|.||:|.|:||::.::.:|||.:|:||..|:..
 Frog   135 AMYVSHQANLALYASGLTTGIVLDVGAGITHTVAIYDGVALPHAVSKLPVAGRTITQYLMKLLTE 199

  Fly   201 EGFNFRSTAEFEIVRSIKEKVCYLATNPQKE-----ETVETEKFAYKLPDGKIFEIGPARFRAPE 260
            .|:||.:.||.||||.||||:||:|.:|..|     :.:..|   |.||||.:.:|....|||||
 Frog   200 NGYNFITAAEREIVRDIKEKLCYIALDPSAEYERNPKDITKE---YTLPDGNVIKIDSQLFRAPE 261

  Fly   261 VLFRPDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKD 325
            .||.|..:|.|..|:..::...|:|..:|:|:.|..|:|||||||||.||.:|:|.||:|.:...
 Frog   262 ALFSPSNIGLEAPGVQGLINNIIQKCPIDIRRALLSNVVLSGGSTLFPGFDERVLRELEKKAPDG 326

  Fly   326 LKIRIAAPQERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRK 374
            ::|::.|..:|.||.|:|.|:|:|:|:||:.||.|.||:|.|...||:|
 Frog   327 VQIKVLAATDRKYSVWIGASVLSSMDSFKENWIRKSEYDEFGPSIVHQK 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 ASKHA_NBD_Arp1 9..375 CDD:466820 171/372 (46%)
actrt2NP_001006111.1 ASKHA_NBD_actin_Arp-T1-3 10..368 CDD:466848 167/361 (46%)

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