DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and actr2a

DIOPT Version :9

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_021326108.1 Gene:actr2a / 406820 ZFINID:ZDB-GENE-040426-2894 Length:399 Species:Danio rerio


Alignment Length:394 Identity:162/394 - (41%)
Similarity:241/394 - (61%) Gaps:41/394 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VVIDNGSGVIKAGFAGEHIPKCRFPNYIGRP-------------KHVRVMAGALEGDIFVGPKAE 63
            ||.|||:|.:|.|:||.:.|:..||..:|||             |..|.|      |:.||.:|.
Zfish     9 VVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTAKVGNIEIKDYRRM------DLMVGDEAS 67

  Fly    64 EHRGLLSIRYPMEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFF 128
            |.|.:|.:.||||:|||.:|:||:.:|.|.:..|:|...:.:..:||||.|:||.:||||..|..
Zfish    68 ELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDSRNCKILLTEPPMNPTKNREKIIEVM 132

  Fly   129 FEGINAPALFVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRY 193
            ||......:::::||||:|||.|.:||||:||||||||..|:||||::||...|:||||||:|||
Zfish   133 FETYQFSGVYIAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRY 197

  Fly   194 LKTLIRREGFNFRSTAEFEIVRSIKEKVCYLATNPQKEETVETEKF----AYKLPDGKIFEIGPA 254
            |..|:...|:.|..:|:||.||.:|||:||:..|.::|:.:..|..    :|.||||::.::|..
Zfish   198 LIKLLLLRGYAFNHSADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRVIKVGGE 262

  Fly   255 RFRAPEVLFRPDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELK 319
            ||.|||.||:|.|:..|..|:.::|..:|:.:|:|.|...|::||||||||::.|...||..|||
Zfish   263 RFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRAEFYKHIVLSGGSTMYPGLPSRLERELK 327

  Fly   320 K-----------HSAKDLKIRIAAPQERLYSTWMGGSILASL----DTFKKMWISKREYEEEGQK 369
            :           ......||||..|..|.:..::||::||.:    |.|   |:::.||:|:|.:
Zfish   328 QLYLERVLKGDVDKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNF---WMTREEYQEKGTR 389

  Fly   370 AVHR 373
            .:.:
Zfish   390 VLEK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:302596 162/394 (41%)
ACTIN 9..376 CDD:214592 162/394 (41%)
actr2aXP_021326108.1 ACTIN 6..393 CDD:214592 162/392 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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