DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and actr10

DIOPT Version :9

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_956464.1 Gene:actr10 / 393139 ZFINID:ZDB-GENE-040426-768 Length:415 Species:Danio rerio


Alignment Length:395 Identity:93/395 - (23%)
Similarity:169/395 - (42%) Gaps:67/395 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEHRGLLSIRYPME 76
            ||||.|:...|.|||||..|:                        |:.|...:|.|...:...::
Zfish    16 VVIDLGAAYTKCGFAGETGPR------------------------FIIPSEIKHPGSQEVVAVVQ 56

  Fly    77 HGIVTD--WNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINAPALFV 139
            ..|.|:  :..::.....:|.:..|.. ..|..|::.|:.|.|...|:..:...|.....|::..
Zfish    57 FNINTEELYTILKEFIHLLYFRHLLVN-PRDRRVVVIESILCPSHYRDTLSRVLFRHFEVPSVLF 120

  Fly   140 SMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLIRRE--- 201
            :...::|:...|..:.:|:|.|...|..:|||||..:..:...:.:.|:.:.:.|::|:..:   
Zfish   121 APSHLMSIMTLGLQSALVMDCGYTETLVLPIYEGIPILSAWEALPMGGKAIHKELQSLLSEQCTV 185

  Fly   202 ------GFNFRSTAEF---EIVRSIKEKVCYLATNPQKEETVETEKF-------------AYKLP 244
                  |....|....   ::|..||.:.|:: ::.|:...::..||             .|.|.
Zfish   186 DTDSSTGLQLPSVISHIPEDVVEDIKVRTCFV-SDLQRGLKIQEAKFNTDAERPAPPPDVDYPLD 249

  Fly   245 DGKIFEI-GPARFRAPEVLFRPDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFK 308
            ..||..: |..|....|:||..|   .|.:.|..:|:.::.|..:|.||:|.:|:::.||:.:..
Zfish   250 GQKILHVKGFIRDSVAEMLFEQD---NEEKSIATLLLDTLVKCPIDTRKVLSENLLIIGGTAMLP 311

  Fly   309 GFGDRLLSELK----KHSAKDL----KIRIAAPQERLYST-WMGGSILASL-DTFKKMWISKREY 363
            ||..|||:|::    |...:|.    ..||.:|..:...| |:||:|..:| |......:|:..|
Zfish   312 GFLHRLLAEIRSLVEKPKYRDALATKSFRIHSPPAKPNCTAWLGGAIFGALQDILGSRSVSRDYY 376

  Fly   364 EEEGQ 368
            ...|:
Zfish   377 NHTGR 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:302596 93/395 (24%)
ACTIN 9..376 CDD:214592 93/395 (24%)
actr10NP_956464.1 NBD_sugar-kinase_HSP70_actin 12..362 CDD:302596 88/374 (24%)
ACTIN 13..362 CDD:214592 88/374 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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